| Detailed Information for Phage Jabberwocky |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Leah Knoor |
| Year Found | 2018 |
| Location Found | Grand Rapids, MI USA |
| Finding Institution | Calvin University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 43.007771 N, 85.668775 W Map |
| Discovery Notes | This phage was taken from wet, black soil that was rich with decaying organic matter. The soil sample was taken about ten meters from the edge of the water and 12cm below the surface at Riverside Park. |
| Naming Notes | This phage is named after the Jabberwock from the poem, "Jabberwocky," by Lewis Carroll. Because of the phage's aggressive nature, it is fitting for it to share its name with a monster. Additionally, the setting of the poem is similar to the location where the phage was discovered. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 15, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1501 |
| Genome length (bp) | 59449 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Mary |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are consistently clear and round with sharp edges. Plaques range from 1mm to 5mm in diameter with most between 3mm and 4mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 84 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN329673 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
87 |
| Pitt Freezer Box Grid# |
A3 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
