Detailed Information for Phage Jalammah |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | JacobAntonello EmmaGarris HannaAlamo LaurenFrank |
Year Found | 2020 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.43 N, 79.96 W Map |
Discovery Notes | Discovered by Jacob Antonello, Emma Garris, Hanna Alamo, and Lauren Frank in bio lab BIOSC 0058-1855 at University of Pittsburgh under instructor Rebecca Bortz, in September 2020. Phage soil samples gathered at 3322 Juliet St. in Pittsburgh by Lauren Frank for the specified lab course. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 20, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 829 |
Genome length (bp) | 51552 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGCCGGTGA |
GC Content | 67.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CV |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Number of Genes | 82 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ150785 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
125 |
Pitt Freezer Box Grid# |
E12 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |