Detailed Information for Phage Kewpiedoll |
Discovery Information |
Isolation Host | Gordonia terrae NRRL B-16283 |
Found By | Laura JoAn Powell, Umar Sahi and Hari Kotturi |
Year Found | 2018 |
Location Found | Santa Rosa, NM USA |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 34.966389 N, 104.87 W Map |
Discovery Notes | Soil was collected from a farm in Santa Rosa New Mexico. |
Naming Notes | The virus is named after Laura's sister, Lorena. Her eyes reminded people of a Kewpie doll. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 18, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 859 |
Genome length (bp) | 59473 |
Character of genome ends | Circularly Permuted |
GC Content | 67.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | La Salle University |
Annotation Status | In GenBank |
Plaque Notes | Plaque has a clear center with a halo. It is approximately 2mm in diameter with the halo. |
Morphotype | Siphoviridae |
Number of Genes | 86 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP172877 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |