Detailed Information for Phage MintFen |
Discovery Information |
Isolation Host | Gordonia terrae CAG3 |
Found By | Jamie Smith |
Year Found | 2018 |
Location Found | Queens, NY USA |
Finding Institution | Alliance University (formerly Nyack College) |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.733056 N, 73.82 W Map |
Discovery Notes | Found in Queens, NY in my grandmothers mint garden. |
Naming Notes | This phage's name was chosen because it is dedicated to my grandmother. She had chosen the location where the sample was taken. Her name is Liu Wu Min Fen (her Chinese name), so I used her sir name "Fen" and her first name and combined the two. However, since this phage was found in her mint garden, I chose to replace her first name "Min" with "mint". Thus, coming up with the name, "MintFen". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 11, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1977 |
Genome length (bp) | 48512 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCCGGTGA |
GC Content | 67.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CV |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Alliance University (formerly Nyack College) |
Annotation Status | In GenBank |
Plaque Notes | Turbid plaque |
Number of Genes | 79 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN010762 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
93 |
Pitt Freezer Box Grid# |
F5 |
Available Files |
GenBank File for Phamerator | Download |