Detailed Information for Phage MissRona |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | E. Morara, H. Shannon, and J. Divinagracia |
Year Found | 2020 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.46008 N, 79.9221 W Map |
Discovery Notes | Found from a soil sample collected outside my apartment under a tree that had some mulch on top of it. Isolated by: Elton Morara, Melanie Faulkner, Heather Shannon, and Jason Divinagracia. |
Naming Notes | We decided on the name MissRona as it is somewhat a joke being that this phage was discovered during a pandemic (Coronavirus). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 11, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2463 |
Genome length (bp) | 53623 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TGGCCGGTGA |
GC Content | 67.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CV |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Medium sized, turbid/hazy plaques. |
Number of Genes | 86 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ622164 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
125 |
Pitt Freezer Box Grid# |
H3 |
Available Files |
GenBank File for Phamerator | Download |