Gordonia phage MissRona
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Detailed Information for Phage MissRona
Discovery Information
Isolation HostGordonia terrae 3612
Found ByE. Morara, H. Shannon, and J. Divinagracia
Year Found2020
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.46008 N, 79.9221 W Map
Discovery NotesFound from a soil sample collected outside my apartment under a tree that had some mulch on top of it. Isolated by: Elton Morara, Melanie Faulkner, Heather Shannon, and Jason Divinagracia.
Naming NotesWe decided on the name MissRona as it is somewhat a joke being that this phage was discovered during a pandemic (Coronavirus).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2463
Genome length (bp)53623
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesMedium sized, turbid/hazy plaques.
Number of Genes86
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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MissRona_1
(terminase small subunit)

MissRona_2
(terminase large subunit)

MissRona_3
(portal protein)

MissRona_4
(capsid maturation protease)

MissRona_5
(scaffolding protein)

MissRona_6
(major capsid protein)

MissRona_7

MissRona_8
(head-to-tail adaptor)

MissRona_9
(head-to-tail stopper)

MissRona_10

MissRona_11

MissRona_12

MissRona_13

MissRona_14

MissRona_15
(tail terminator)

MissRona_16
(major tail protein)

MissRona_17
(tail assembly chaperone)

MissRona_18
(tail assembly chaperone)

MissRona_19
(tape measure protein)

MissRona_20
(minor tail protein)

MissRona_21
(minor tail protein)

MissRona_22
(lysin A, L-Ala-D-Glu peptidase domain)

MissRona_23
(lysin A, glycosyl hydrolase domain)

MissRona_24
(holin)

MissRona_25

MissRona_26

MissRona_27
(lysin B)

MissRona_28

MissRona_29
(minor tail protein)

MissRona_30
(minor tail protein)

MissRona_31

MissRona_32
(minor tail protein)

MissRona_33

MissRona_34

MissRona_35

MissRona_36

MissRona_37

MissRona_38
(serine integrase)

MissRona_39
(helix-turn-helix DNA binding protein)

MissRona_40
(metalloprotease)

MissRona_41

MissRona_42
(helix-turn-helix DNA binding protein)

MissRona_43

MissRona_44
(immunity repressor)

MissRona_45
(helix-turn-helix DNA binding protein)

MissRona_46

MissRona_47
(antirepressor)

MissRona_48

MissRona_49

MissRona_50

MissRona_51

MissRona_52

MissRona_53

MissRona_54

MissRona_55

MissRona_56

MissRona_57

MissRona_58
(DnaQ-like DNA polymerase III subunit)

MissRona_59
(exonuclease)

MissRona_60
(RecT-like ssDNA binding domain protein)

MissRona_61

MissRona_62

MissRona_63

MissRona_64

MissRona_65

MissRona_66

MissRona_67

MissRona_68
(nucleotidyl transferase)

MissRona_69

MissRona_70

MissRona_71

MissRona_72

MissRona_73
(HNH endonuclease)

MissRona_74

MissRona_75

MissRona_76

MissRona_77

MissRona_78

MissRona_79

MissRona_80
(RuvC-like resolvase)

MissRona_81

MissRona_82

MissRona_83
(helix-turn-helix DNA binding protein)

MissRona_84

MissRona_85

MissRona_86
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ622164
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 125
Pitt Freezer Box Grid# H3
Available Files
GenBank File for PhameratorDownload