| Detailed Information for Phage Phinally |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Audrey Jonas |
| Year Found | 2015 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.94085 N, 79.621814 W Map |
| Discovery Notes | Soil was collected from a flowerbed exposed to the high level of rainfall that has been occurring over the past two days. Weather was rainy and slightly humid at time of collection. Soil was near flowers and shrubs, not beneath any plant or other barrier. |
| Naming Notes | Seven soil samples in, I was beginning to doubt that a phage would be found. Thankfully I phinally phound a phage. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 13, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 545 |
| Genome length (bp) | 59265 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are round and clear; approximately 0.5 mm in diameter |
| Morphotype | Siphoviridae |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU963253 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
2 |
| Pitt Freezer Box Grid# |
H2 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
