Gordonia phage PrincePatrick
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Detailed Information for Phage PrincePatrick
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByEric Fisher
Year Found2022
Location FoundCleveland, OH United States
Finding InstitutionCase Western Reserve University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.4719 N, 81.5269 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage773
Genome length (bp)48826
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGCCGGTGA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMiami University
Annotation StatusIn GenBank
Plaque Notessmall clear plaques
MorphotypeSiphoviridae
Number of Genes80
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

PrincePatrick_1
(terminase small subunit)

PrincePatrick_2
(terminase large subunit)

PrincePatrick_3
(portal protein)

PrincePatrick_4
(capsid maturation protease)

PrincePatrick_5
(scaffolding protein)

PrincePatrick_6
(major capsid protein)

PrincePatrick_7

PrincePatrick_8
(head-to-tail adaptor)

PrincePatrick_9
(head-to-tail stopper)

PrincePatrick_10

PrincePatrick_11

PrincePatrick_12

PrincePatrick_13
(tail terminator)

PrincePatrick_14
(major tail protein)

PrincePatrick_15
(tail assembly chaperone)

PrincePatrick_16
(tail assembly chaperone)

PrincePatrick_17
(tape measure protein)

PrincePatrick_18
(minor tail protein)

PrincePatrick_19
(minor tail protein)

PrincePatrick_20
(lysin A)

PrincePatrick_21
(holin)

PrincePatrick_22

PrincePatrick_23

PrincePatrick_24

PrincePatrick_25
(lysin B)

PrincePatrick_26

PrincePatrick_27
(minor tail protein)

PrincePatrick_28
(minor tail protein)

PrincePatrick_29

PrincePatrick_30
(minor tail protein)

PrincePatrick_31

PrincePatrick_32

PrincePatrick_33

PrincePatrick_34

PrincePatrick_35

PrincePatrick_36

PrincePatrick_37
(HNH endonuclease)

PrincePatrick_38
(serine integrase)

PrincePatrick_39
(helix-turn-helix DNA binding domain)

PrincePatrick_40
(IrrE-like protein)

PrincePatrick_41

PrincePatrick_42
(immunity repressor)

PrincePatrick_43
(Cro control of repressor's operator)

PrincePatrick_44

PrincePatrick_45

PrincePatrick_46

PrincePatrick_47

PrincePatrick_48

PrincePatrick_49

PrincePatrick_50

PrincePatrick_51

PrincePatrick_52

PrincePatrick_53

PrincePatrick_54

PrincePatrick_55

PrincePatrick_56

PrincePatrick_57
(RecE-like exonuclease)

PrincePatrick_58
(RecT-like DNA pairing protein)

PrincePatrick_59

PrincePatrick_60

PrincePatrick_61

PrincePatrick_62

PrincePatrick_63

PrincePatrick_64

PrincePatrick_65

PrincePatrick_66
(ASC-1 transcription coactivator)

PrincePatrick_67

PrincePatrick_68

PrincePatrick_69

PrincePatrick_70

PrincePatrick_71

PrincePatrick_72

PrincePatrick_73

PrincePatrick_74

PrincePatrick_75

PrincePatrick_76
(RuvC-like resolvase)

PrincePatrick_77

PrincePatrick_78

PrincePatrick_79
(helix-turn-helix DNA binding domain)

PrincePatrick_80
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP978805
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 156
Pitt Freezer Box Grid# G5
Available Files
EM PictureDownload
GenBank File for PhameratorDownload