Gordonia phage Saronaya
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Detailed Information for Phage Saronaya
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByMaya Lev
Year Found2022
Location FoundSt. Louis, MO United States
Finding InstitutionSt. Louis Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates38.56878 N, 90.42151 W Map
Naming NotesThe name comes from a combination of one syllable from my and my 3 friends' names. We lived at an international school together and all come from different countries. I wanted to name the phage this so that no matter what happens, there will always be something out in this world that keeps our friendship alive.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 31, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage932
Genome length (bp)58305
Character of genome endsCircularly Permuted
GC Content68.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSt. Louis Community College
Annotation StatusQC Complete
Number of Genes87
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Saronaya_1
(helix-turn-helix DNA binding domain)

Saronaya_2
(terminase)

Saronaya_3

Saronaya_4

Saronaya_5

Saronaya_6

Saronaya_7

Saronaya_8

Saronaya_9

Saronaya_10
(lipoprotein)

Saronaya_11

Saronaya_12
(portal protein)

Saronaya_13

Saronaya_14

Saronaya_15

Saronaya_16

Saronaya_17
(RNA ligase)

Saronaya_18

Saronaya_19

Saronaya_20

Saronaya_21

Saronaya_22

Saronaya_23
(major tail protein)

Saronaya_24

Saronaya_25
(esterase)

Saronaya_26
(head-to-tail adaptor)

Saronaya_27

Saronaya_28

Saronaya_29
(minor capsid protein)

Saronaya_30
(tail assembly chaperone)

Saronaya_31

Saronaya_32
(tape measure protein)

Saronaya_33
(minor tail protein)

Saronaya_34
(minor tail protein)

Saronaya_35

Saronaya_36
(minor tail protein)

Saronaya_37

Saronaya_38

Saronaya_39

Saronaya_40

Saronaya_41
(lysin A)

Saronaya_42
(holin)

Saronaya_43

Saronaya_44

Saronaya_45
(lysin B)

Saronaya_46

Saronaya_47
(exonuclease)

Saronaya_48

Saronaya_49
(HNH endonuclease)

Saronaya_50
(RecT-like DNA pairing protein)

Saronaya_51

Saronaya_52

Saronaya_53
(DNA binding domain)

Saronaya_54

Saronaya_55

Saronaya_56

Saronaya_57

Saronaya_58

Saronaya_59

Saronaya_60

Saronaya_61

Saronaya_62

Saronaya_63

Saronaya_64

Saronaya_65

Saronaya_66

Saronaya_67

Saronaya_68
(RuvC-like resolvase)

Saronaya_69

Saronaya_70

Saronaya_71

Saronaya_72

Saronaya_73

Saronaya_74

Saronaya_75

Saronaya_76

Saronaya_77

Saronaya_78

Saronaya_79

Saronaya_80

Saronaya_81

Saronaya_82

Saronaya_83

Saronaya_84

Saronaya_85

Saronaya_86
(helix-turn-helix DNA binding domain)

Saronaya_87
(methyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 161
Pitt Freezer Box Grid# C5
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload