| Detailed Information for Phage Tangerine |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Wren Jenkins |
| Year Found | 2016 |
| Location Found | Bowling Green, KY USA |
| Finding Institution | Western Kentucky University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.981111 N, 86.456944 W Map |
| Discovery Notes | Phage was discovered at 3:45 pm September 11th, 2016, at the Western Kentucky Office of Sustainability in Bowling Green, KY. Discovery Conditions were partly cloudy, with temperature 26.1 degrees Celsius (79 degrees Fahrenheit). The soil sample had medium-to-high moisture levels, and was taken from the Sustainability Office's compost pile. The sample was taken at a depth of 3 inches. |
| Naming Notes | Gordonia terrae lawns are tangerine-orange in color. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 3, 2017 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 261 |
| Genome length (bp) | 57306 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Western Kentucky University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques range from the size of a pin-prick to approximately 2 millimeters. On the larger plaques, there was a completely clear area in the center surrounded by a slightly hazy halo closer to the edges. |
| Morphotype | Siphoviridae |
| Number of Genes | 85 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK967396 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2016WEKUtangerineWJ |
| SEA Lysate Titer |
2.5 x 10^9 pfu/mL |
| Pitt Freezer Box# |
37 |
| Pitt Freezer Box Grid# |
D7 |
| Available Files |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
