| Detailed Information for Phage Tardus |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Shifa Shaikh |
| Year Found | 2021 |
| Location Found | Weston, FL United States |
| Finding Institution | University of South Florida |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 26.068611 N, 80.376667 W Map |
| Discovery Notes | The soil was moist and dark (mostly loam soil). It was covered with grass.
The weather was humid. |
| Naming Notes | The phage was slow at growing. Hence, I named it Tardus, which means slow in Latin. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 29, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 481 |
| Genome length (bp) | 59861 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of South Florida |
| Annotation Status | In GenBank |
| Plaque Notes | Clear and tiny plaques were observed. The plaques took quite some time to appear. They were circular with definite boundaries. |
| Morphotype | Siphoviridae |
| Number of Genes | 90 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON392159 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
132 |
| Pitt Freezer Box Grid# |
F9 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
