Detailed Information for Phage Tenda |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Leah Szpak |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.2647 N, 79.5716 W Map |
Discovery Notes | The soil used to isolate Tenda was collected nearly a month before it was processed. |
Naming Notes | "Tenda" comes from the small green creatures that live underground in Nintendo's SNES game, "EarthBound" ("Mother 2" in Japan). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 29, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1439 |
Genome length (bp) | 41553 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Tenda has a dual morphology, producing clear plaques of around 2mm and 4mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG839028 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
6 |
Pitt Freezer Box Grid# |
B5 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |