| Detailed Information for Phage Walrus |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Matthew Montgomery |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.442567 N, 79.957276 W Map |
| Discovery Notes | This phage was a contaminant in a BetterKatz lysate. I isolated it by plating the contaminated lysate on the Betterkatz lysogen (so only the contaminant can infect). From there I purified and amplified using standard protocols. |
| Naming Notes | Walruses are interesting animals. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 20, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 551 |
| Genome length (bp) | 52024 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TGGCCGGTGA |
| GC Content | 67.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CV |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Emperor is able to form a G. terrae 3612 lysogen. |
| Other Cluster Members |
|
| Annotating Institution | Gettysburg College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are small and turbid (may form lysogen). |
| Morphotype | Siphoviridae |
| Number of Genes | 84 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK501729 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
6 |
| Pitt Freezer Box Grid# |
E8 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |