| Detailed Information for Phage Zilla | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Alexandra Crowshaw |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.443885 N, 79.951983 W Map |
| Discovery Notes | Lab Group Members: Alexandra Crowshaw, Marissa Bordone, Daniel Mera Discovery Notes: Sample found from a lot of green grass under the log cabin by The Cathedral of Learning. The soil was a light brown with lots of debris, but there was no trouble filtering the sample. Also, it was collected on a hot and sunny day, so the soil was dry. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 7, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 3759 |
| Genome length (bp) | 48080 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CCTCCGGTGA |
| GC Content | 67.3% |
| Sequencing Notes | In position 27790 approx. 40% of reads contain a G to A substitution. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CV |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewArchis Azula Barco Begonia BlingBling Blino Blueberry CaptainKirk2 CarolAnn Delian Fairfaxidum Fenry Frokostdame Gambino Guacamole Hitter Jalammah JasperJr JuJu KappaFarmDelta Lysidious Malachai Melba Mellie MintFen MissRona Murp Obliviate PCoral7 Petra PhrostedPhlake Pipp PrincePatrick Samba Toast UmaThurman Utz Walrus William Wisp Wocket Zarbodnamra ZiggyZoo Zilla |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 12/31/2025) |
| Plaque Notes | Plaques are highly distributed amongst G. rubi bacterial host |
| Number of Genes | 77 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewZilla_1 Zilla_2 Zilla_3 Zilla_4 Zilla_5 Zilla_6 Zilla_7 Zilla_8 Zilla_9 Zilla_10 Zilla_11 Zilla_12 Zilla_13 Zilla_14 Zilla_15 Zilla_16 Zilla_17 Zilla_18 Zilla_19 Zilla_20 Zilla_21 Zilla_22 Zilla_23 Zilla_24 Zilla_25 Zilla_26 Zilla_27 Zilla_28 Zilla_29 Zilla_30 Zilla_31 Zilla_32 Zilla_33 — tRNA Zilla_34 Zilla_35 Zilla_36 Zilla_37 Zilla_38 Zilla_39 Zilla_40 Zilla_41 Zilla_42 Zilla_43 Zilla_44 Zilla_45 Zilla_46 Zilla_47 Zilla_48 Zilla_49 Zilla_50 Zilla_51 Zilla_52 Zilla_53 Zilla_54 Zilla_55 Zilla_56 Zilla_57 Zilla_58 Zilla_59 Zilla_60 Zilla_61 Zilla_62 Zilla_63 Zilla_64 Zilla_65 Zilla_66 Zilla_67 Zilla_68 Zilla_69 Zilla_70 Zilla_71 Zilla_72 Zilla_73 Zilla_74 Zilla_75 Zilla_76 Zilla_77 Zilla_78 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 214 |
| Pitt Freezer Box Grid# | F12 |
| Available Files | |
| Plaque Picture | Download |
