Detailed Information for Phage Derg |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Austin Perkins, Breanna Gottschalck |
Year Found | 2018 |
Location Found | West Monroe, LA USA |
Finding Institution | University of Louisiana at Monroe |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 32.5625 N, 92.16389 W Map |
Discovery Notes | Soil in a shaded area next to a plant, collected an inch deep. The area is where I dump dead frogs after cleaning my pool. |
Naming Notes | Named after Dr. G (Gissendanner) with an added vowel. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 21, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 143 |
Genome length (bp) | 56209 |
Character of genome ends | Circularly Permuted |
GC Content | 68.1% |
Sequencing Notes | This phage was sequenced as part of a DOGEMS mixed sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Louisiana at Monroe |
Annotation Status | Awaiting_QC |
Plaque Notes | The plaques were small and clear. |
Number of Genes | 84 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
79 |
Pitt Freezer Box Grid# |
B7 |