Gordonia phage JuJu
JuJu Plaque Picture
JuJu EM Picture
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Detailed Information for Phage JuJu
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLauren Callewaert
Year Found2017
Location FoundPittsburgh, PA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.443889 N, 79.960833 W Map
Discovery NotesThe soil sample was collected from an area of dark, soft soil that had woodchips on top of the soil collected. There were also bushes growing around the area from which the soil was collected. The temperature was around 30 degrees Fahrenheit when it was collected.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 29, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage923
Genome length (bp)54000
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCollege of Charleston
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes88
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

JuJu_1
(terminase small subunit)

JuJu_2
(terminase large subunit)

JuJu_3
(portal protein)

JuJu_4
(capsid maturation protease)

JuJu_5
(scaffolding protein)

JuJu_6
(major capsid protein)

JuJu_7

JuJu_8
(head-to-tail adaptor)

JuJu_9
(head-to-tail stopper)

JuJu_10

JuJu_11

JuJu_12

JuJu_13
(tail terminator)

JuJu_14
(major tail protein)

JuJu_15
(tail assembly chaperone)

JuJu_16
(tail assembly chaperone)

JuJu_17
(tape measure protein)

JuJu_18
(minor tail protein)

JuJu_19
(minor tail protein)

JuJu_20
(lysin A, L-Ala-D-Glu peptidase domain)

JuJu_21
(lysin A, glycosyl hydrolase domain)

JuJu_22
(holin)

JuJu_23

JuJu_24

JuJu_25

JuJu_26
(lysin B)

JuJu_27

JuJu_28
(minor tail protein)

JuJu_29
(minor tail protein)

JuJu_30

JuJu_31

JuJu_32
(minor tail protein)

JuJu_33

JuJu_34

JuJu_35

JuJu_36

JuJu_37
(RelB-like antitoxin)

JuJu_38
(RelE-like toxin)

JuJu_39

JuJu_40

JuJu_41
(serine integrase)

JuJu_42

JuJu_43
(helix-turn-helix DNA binding protein)

JuJu_44

JuJu_45
(helix-turn-helix DNA binding domain protein)

JuJu_46

JuJu_47
(immunity repressor)

JuJu_48

JuJu_49

JuJu_50
(antirepressor)

JuJu_51

JuJu_52

JuJu_53

JuJu_54

JuJu_55

JuJu_56

JuJu_57

JuJu_58

JuJu_59

JuJu_60

JuJu_61

JuJu_62

JuJu_63

JuJu_64
(exonuclease)

JuJu_65
(RecT-like ssDNA binding protein)

JuJu_66

JuJu_67

JuJu_68

JuJu_69

JuJu_70

JuJu_71

JuJu_72

JuJu_73

JuJu_74
(DNA methylase)

JuJu_75

JuJu_76

JuJu_77
(HNH endonuclease)

JuJu_78

JuJu_79

JuJu_80

JuJu_81

JuJu_82
(RuvC-like resolvase)

JuJu_83

JuJu_84

JuJu_85
(helix-turn-helix DNA binding protein)

JuJu_86

JuJu_87

JuJu_88
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN062704
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 55
Pitt Freezer Box Grid# G11
Available Files
Restriction Digest PictureDownload
GenBank File for PhameratorDownload