Detailed Information for Phage LimaBean |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Marissa Lima |
Year Found | 2020 |
Location Found | Worcester, MA USA |
Finding Institution | Worcester Polytechnic Institute |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 42.2751 N, 71.8085 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 7, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 933 |
Genome length (bp) | 41253 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Lagos |
Annotation Status | In GenBank |
Number of Genes | 68 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OQ938583 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
5X10^11 |
Pitt Freezer Box# |
131 |
Pitt Freezer Box Grid# |
B11 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |