Microbacterium phage LimaBean
LimaBean Plaque Picture
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Detailed Information for Phage LimaBean
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByMarissa Lima
Year Found2020
Location FoundWorcester, MA USA
Finding InstitutionWorcester Polytechnic Institute
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.2751 N, 71.8085 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 7, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage933
Genome length (bp)41253
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Lagos
Annotation StatusIn GenBank
Number of Genes68
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

LimaBean_1

LimaBean_2
(terminase small subunit)

LimaBean_3
(terminase large subunit)

LimaBean_4
(portal protein)

LimaBean_5
(capsid maturation protease)

LimaBean_6
(major capsid protein)

LimaBean_7

LimaBean_8
(head-to-tail adaptor)

LimaBean_9

LimaBean_10

LimaBean_11
(tail terminator)

LimaBean_12
(major tail protein)

LimaBean_13
(tail assembly chaperone)

LimaBean_14
(tail assembly chaperone)

LimaBean_15

LimaBean_16
(tape measure protein)

LimaBean_17
(minor tail protein)

LimaBean_18
(minor tail protein)

LimaBean_19

LimaBean_20
(minor tail protein)

LimaBean_21

LimaBean_22
(endolysin)

LimaBean_23
(holin)

LimaBean_24

LimaBean_25

LimaBean_26

LimaBean_27

LimaBean_28
(Cas4 family exonuclease)

LimaBean_29

LimaBean_30

LimaBean_31
(MazG-like nucleotide pyrophosphohydrolase)

LimaBean_32
(thymidylate kinase)

LimaBean_33
(recombination directionality factor)

LimaBean_34

LimaBean_35
(glutaredoxin)

LimaBean_36
(holliday junction resolvase)

LimaBean_37

LimaBean_38

LimaBean_39

LimaBean_40

LimaBean_41
(DNA primase)

LimaBean_42
(DNA polymerase I)

LimaBean_43

LimaBean_44

LimaBean_45
(DNA binding protein)

LimaBean_46

LimaBean_47

LimaBean_48

LimaBean_49
(ParB-like nuclease domain protein)

LimaBean_50

LimaBean_51

LimaBean_52
(HNH endonuclease)

LimaBean_53

LimaBean_54

LimaBean_55

LimaBean_56

LimaBean_57
(dihydrofolate reductase)

LimaBean_58

LimaBean_59
(thymidylate synthase)

LimaBean_60

LimaBean_61

LimaBean_62

LimaBean_63

LimaBean_64

LimaBean_65

LimaBean_66

LimaBean_67 — tRNA
(tRNA-Gln(ctg))

LimaBean_68
(HNH endonuclease)

LimaBean_69

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ938583
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5X10^11
Pitt Freezer Box# 131
Pitt Freezer Box Grid# B11
Available Files
EM PictureDownload
GenBank File for PhameratorDownload