Detailed Information for Phage Love |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Hailey Malandra |
Year Found | 2019 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.4421 N, 79.9563 W Map |
Discovery Notes | I discovered this phage in very grainy/sandy soil. This whether was clear and dry but it had rained prior to the soil discovery so the soil was slightly damp. I collected the soil off of a very busy street at the University of Pittsburgh where there had been a water main break a few days prior. |
Naming Notes | The name "Love" was chosen because I have a lot of love for this lab and I take care of this phage as if it were my child. Growing up my mother always called me Hailey-bug or Love-bug and I thought it was appropriate to name it "Love" since it is my love bug. Also I think it is cute. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 696 |
Genome length (bp) | 60042 |
Character of genome ends | Circularly Permuted |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | The morphology of my phage's plaques were both small and large plaques even though many rounds of serial dilution we performed. The plaques were consistently clear as well. |
Morphotype | Siphoviridae |
Number of Genes | 91 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT723934 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
7.7 x 10^10 |
Pitt Freezer Box# |
114 |
Pitt Freezer Box Grid# |
F3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |