| Detailed Information for Phage Nagem |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Megan Ulbrich |
| Year Found | 2017 |
| Location Found | PIttsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.447222 N, 79.954167 W Map |
| Discovery Notes | Nagem was isolated from a extremely fine and dry soil sample collected in the Pittsburgh area. |
| Naming Notes | Nagem is just my name spelled backwards. At the time of isolation, I was tasked with naming over 30 other phages and at one point, I just ran out of ideas. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Oct 9, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1792 |
| Genome length (bp) | 41846 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Nagem plaques are clear and range in size from 1mm to ~4mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH045560 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
6 |
| Pitt Freezer Box Grid# |
H8 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |