Gordonia phage PCoral7
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Detailed Information for Phage PCoral7
Discovery Information
Isolation HostGordonia terrae 3612
Found ByO. Thornton, T. Umstead, E. Carroll, J. Ujhazy
Year Found2020
Location FoundMonaca, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.588473 N, 80.243633 W Map
Discovery NotesSoil from Penn State Beaver campus was collected 8/31/20 around 3 pm. Soil varied in color and particle size with some mulch and straw present.
Naming NotesWe chose the 7th plaque out of our options which is also a lucky number, coral is a lucky stone, and the P in the beginning is for phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage719
Genome length (bp)49604
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGCCGGTGA
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesOur plaque was small and turbid, with a diameter of about 1mm.
Number of Genes80
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PCoral7_1
(terminase small subunit)

PCoral7_2
(terminase large subunit)

PCoral7_3
(portal protein)

PCoral7_4
(capsid maturation protease)

PCoral7_5
(scaffolding protein)

PCoral7_6
(major capsid protein)

PCoral7_7

PCoral7_8
(head-to-tail adaptor)

PCoral7_9
(head-to-tail stopper)

PCoral7_10

PCoral7_11

PCoral7_12

PCoral7_13
(tail terminator)

PCoral7_14
(major tail protein)

PCoral7_15
(tail assembly chaperone)

PCoral7_16
(tail assembly chaperone)

PCoral7_17
(tape measure protein)

PCoral7_18
(minor tail protein)

PCoral7_19
(minor tail protein)

PCoral7_20
(lysin A, protease M15 domain)

PCoral7_21

PCoral7_22
(lysin A, glycosyl hydrolase domain)

PCoral7_23
(holin)

PCoral7_24

PCoral7_25

PCoral7_26
(lysin B)

PCoral7_27

PCoral7_28
(minor tail protein)

PCoral7_29
(minor tail protein)

PCoral7_30

PCoral7_31

PCoral7_32
(minor tail protein)

PCoral7_33

PCoral7_34

PCoral7_35

PCoral7_36

PCoral7_37
(serine integrase)

PCoral7_38
(helix-turn-helix DNA binding domain protein)

PCoral7_39

PCoral7_40
(IrrE-like protein)

PCoral7_41

PCoral7_42

PCoral7_43
(immunity repressor)

PCoral7_44
(helix-turn-helix DNA binding domain protein)

PCoral7_45

PCoral7_46

PCoral7_47

PCoral7_48

PCoral7_49

PCoral7_50

PCoral7_51

PCoral7_52

PCoral7_53

PCoral7_54

PCoral7_55

PCoral7_56

PCoral7_57

PCoral7_58
(exonuclease)

PCoral7_59
(RecT-like ssDNA binding protein)

PCoral7_60

PCoral7_61

PCoral7_62

PCoral7_63

PCoral7_64

PCoral7_65

PCoral7_66

PCoral7_67

PCoral7_68

PCoral7_69

PCoral7_70

PCoral7_71

PCoral7_72

PCoral7_73

PCoral7_74
(RuvC-like resolvase)

PCoral7_75

PCoral7_76
(helix-turn-helix DNA binding domain protein)

PCoral7_77

PCoral7_78

PCoral7_79

PCoral7_80
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON724012
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 126
Pitt Freezer Box Grid# A6
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload