| Detailed Information for Phage Shamu |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Former names | Chickfila |
| Found By | Shayler Van Gelder |
| Year Found | 2023 |
| Location Found | Orange City, IA United States |
| Finding Institution | Northwestern College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 30°C |
| GPS Coordinates | 43.001176 N, 96.044732 W Map |
| Discovery Notes | Soil from Dr. Tolsma's garden. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 862 |
| Genome length (bp) | 40239 |
| Character of genome ends | Circularly Permuted |
| GC Content | 62.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Northwestern College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are 4mm in diameter, they have a cloudy center and a rough edge. |
| Morphotype | Siphoviridae |
| Number of Genes | 62 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP405134 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
173 |
| Pitt Freezer Box Grid# |
C6 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
