| Detailed Information for Phage Thompsone |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Bailey Barbour |
| Year Found | 2021 |
| Location Found | Webster Groves, MO United States |
| Finding Institution | Webster University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 4°C |
| GPS Coordinates | 38.58949 N, 90.342606 W Map |
| Discovery Notes | My soil was collected roughly 0.5-1 inch below surface around the roots of a dead bush. The soil was moist and full of organic material. I collected 7.5 ml of soil and directly scooped it into a sterile tube only using the tube to get the soil in. The soil was used for a plaque assay only one hour after being collected. |
| Naming Notes | The name came from my favorite cat, Thompsone. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 13, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 4154 |
| Genome length (bp) | 41800 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Webster University |
| Annotation Status | In GenBank |
| Plaque Notes | My phage presents itself with two different sized plaques (some big and some small). |
| Morphotype | Siphoviridae |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON970605 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
137 |
| Pitt Freezer Box Grid# |
C6 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |