Microbacterium phage WestPM
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| Detailed Information for Phage WestPM | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Charles J West |
| Year Found | 2023 |
| Location Found | Pensacola, FL |
| Finding Institution | University of West Florida |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 30.33073 N, 87.14191 W Map |
| Discovery Notes | The environmental samples were collected from three locations in Casino Beach FL; the samples contained beach sand and coquina clams. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 8, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 6541 |
| Genome length (bp) | 39693 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EA |
| Subcluster | EA11 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of West Florida |
| Annotation Status | In GenBank |
| Plaque Notes | 1.5mm diameter, hazy plaque with a halo and inconsistent border |
| Morphotype | Siphoviridae |
| Number of Genes | 59 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978895 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 167 |
| Pitt Freezer Box Grid# | F7 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
