| Detailed Information for Phage Bonum |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Mohammed Laswad |
| Year Found | 2020 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.3911 N, 74.9868 W Map |
| Discovery Notes | soil collected from a garden on 8/22/20 on a sunny day by Mohammed Laswad
Purified by Mohammaed Laswad, Madison Haver, Sacun Tang, and Ira Sharma.
Isolated and characterized by Alaina Marsinetti, Caroline Webb, Lia Robben, and Claire Chuang. |
| Naming Notes | soil sample was the "good" stuff
Bonum means good in Latin |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 20, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 235 |
| Genome length (bp) | 64476 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCCGCGTAC |
| GC Content | 65.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CR |
| Subcluster | CR2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | 1 mm in size
clear
round
no mesas |
| Number of Genes | 88 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ322010 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
125 |
| Pitt Freezer Box Grid# |
C4 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
