Gordonia phage Leonard
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Detailed Information for Phage Leonard
Discovery Information
Isolation HostGordonia terrae 3612
Found ByTalia Piretra
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature59°C
GPS Coordinates40.439241 N, 79.956067 W Map
Naming NotesIt's a respectable name for a virus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 19, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2100
Genome length (bp)59268
Character of genome endsCircularly Permuted
GC Content68.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesShows "haloed" plaques, indicating a lysogenic cycle. Plaques also occur with two distinct diameters : 1 mm and 3.5 mm.
MorphotypeSiphoviridae
Number of Genes87
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Leonard_1
(helix-turn-helix DNA binding protein)

Leonard_2
(terminase)

Leonard_3

Leonard_4

Leonard_5
(DNA methylase)

Leonard_6

Leonard_7

Leonard_8

Leonard_9

Leonard_10

Leonard_11

Leonard_12

Leonard_13
(portal protein)

Leonard_14

Leonard_15
(MuF-like minor capsid protein)

Leonard_16

Leonard_17

Leonard_18
(RNA ligase)

Leonard_19

Leonard_20

Leonard_21
(major capsid hexamer protein)

Leonard_22

Leonard_23

Leonard_24
(major tail protein)

Leonard_25
(head-to-tail adaptor)

Leonard_26

Leonard_27

Leonard_28

Leonard_29
(tail assembly chaperone)

Leonard_30

Leonard_31
(tape measure protein)

Leonard_32
(minor tail protein)

Leonard_33
(minor tail protein)

Leonard_34
(minor tail protein)

Leonard_35
(minor tail protein)

Leonard_36

Leonard_37

Leonard_38
(minor tail protein)

Leonard_39

Leonard_40
(lysin A)

Leonard_41

Leonard_42

Leonard_43

Leonard_44
(lysin B)

Leonard_45

Leonard_46

Leonard_47
(exonuclease)

Leonard_48

Leonard_49
(RecT-like DNA pairing protein)

Leonard_50

Leonard_51
(helix-turn-helix DNA binding protein)

Leonard_52

Leonard_53

Leonard_54

Leonard_55

Leonard_56

Leonard_57

Leonard_58

Leonard_59

Leonard_60

Leonard_61
(methyltransferase)

Leonard_62

Leonard_63

Leonard_64
(RuvC-like resolvase)

Leonard_65

Leonard_66

Leonard_67

Leonard_68

Leonard_69

Leonard_70

Leonard_71

Leonard_72

Leonard_73

Leonard_74
(polynucleotide kinase)

Leonard_75

Leonard_76

Leonard_77

Leonard_78

Leonard_79
(DnaQ-like DNA polymerase III subunit)

Leonard_80

Leonard_81

Leonard_82

Leonard_83

Leonard_84

Leonard_85

Leonard_86

Leonard_87

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586026
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 57
Pitt Freezer Box Grid# E11
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload