The Actinobacteriophage Database | Phage MichelleMyBell

Mycobacterium phage MichelleMyBell

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Detailed Information for Phage MichelleMyBell
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Former names	MichelleMyBelle
Found By	Jake Hackel
Year Found	2012
Location Found	Nyack, NY USA
Finding Institution	Alliance University (formerly Nyack College)
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	41.088333 N, 73.931944 W Map
Discovery Notes	2 inches into the dirt under mulch behind a library in a low foot traffic area. Found in a garden at about 11:30 on September 20. It was about 82 degrees outside in the shade where it was found.
Naming Notes	My future wife's name. :)
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 16, 2013
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Ion Torrent Sequencing
Approximate Shotgun Coverage	1250
Sanger Finishing Reactions	3
Genome length (bp)	42240
Character of genome ends	3' Sticky Overhang
Overhang Length	13 bases
Overhang Sequence	CCCGCCGCCTTGG
GC Content	66.0%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	N
Subcluster	--
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Aggie Andies BabeRuth Bosection6 Butters Carcharodon Charlie Chewbacca Duplicity Fulbright Gex Jamie19 Kevin1 Magsby MichelleMyBell Nenae Panchino Parmesanjohn PhancyPhin Philonius Phloss Phrann Pipsqueaks Purgamenstris Raymond7 Rebel Redi Rubeelu Schnauzer ShrimpFriedEgg Shweta Silvafighter SkinnyPete Smurph Snekmaggedon SpongeBob Tapioca Xeno Xerxes
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	70
Has been Phamerated?	Yes
Gene List	Click to View MichelleMyBell_1 MichelleMyBell_2 (terminase large subunit) MichelleMyBell_3 MichelleMyBell_4 (portal protein) MichelleMyBell_5 (capsid maturation protease) MichelleMyBell_6 (major capsid protein) MichelleMyBell_7 MichelleMyBell_8 MichelleMyBell_9 (head-to-tail stopper) MichelleMyBell_10 MichelleMyBell_11 MichelleMyBell_12 MichelleMyBell_13 (major tail protein) MichelleMyBell_14 (tail assembly chaperone) MichelleMyBell_15 (tail assembly chaperone) MichelleMyBell_16 (tape measure protein) MichelleMyBell_17 (minor tail protein) MichelleMyBell_18 (minor tail protein) MichelleMyBell_19 (minor tail protein) MichelleMyBell_20 (minor tail protein) MichelleMyBell_21 (minor tail protein) MichelleMyBell_22 (minor tail protein) MichelleMyBell_23 MichelleMyBell_24 MichelleMyBell_25 MichelleMyBell_26 (lysin A) MichelleMyBell_27 (holin) MichelleMyBell_28 MichelleMyBell_29 MichelleMyBell_30 MichelleMyBell_31 MichelleMyBell_32 MichelleMyBell_33 MichelleMyBell_34 (tyrosine integrase) MichelleMyBell_35 (immunity repressor) MichelleMyBell_36 (excise) MichelleMyBell_37 MichelleMyBell_38 MichelleMyBell_39 MichelleMyBell_40 MichelleMyBell_41 MichelleMyBell_42 MichelleMyBell_43 MichelleMyBell_44 MichelleMyBell_45 (WhiB family transcription factor) MichelleMyBell_46 MichelleMyBell_47 (RecE-like exonuclease) MichelleMyBell_48 (RecT-like DNA pairing protein) MichelleMyBell_49 (RusA-like resolvase) MichelleMyBell_50 MichelleMyBell_51 MichelleMyBell_52 MichelleMyBell_53 MichelleMyBell_54 MichelleMyBell_55 MichelleMyBell_56 MichelleMyBell_57 MichelleMyBell_58 MichelleMyBell_59 MichelleMyBell_60 MichelleMyBell_61 MichelleMyBell_62 MichelleMyBell_63 MichelleMyBell_64 MichelleMyBell_65 MichelleMyBell_66 MichelleMyBell_67 MichelleMyBell_68 MichelleMyBell_69 MichelleMyBell_70
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KF986246
Refseq Number	NC_023572
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	37
Pitt Freezer Box Grid#	54
Available Files
Plaque Picture	Download
Final DNAMaster File	Download

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