Detailed Information for Phage MichelleMyBell |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | MichelleMyBelle |
Found By | Jake Hackel |
Year Found | 2012 |
Location Found | Nyack, NY USA |
Finding Institution | Nyack College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 41.088333 N, 73.931944 W Map |
Discovery Notes | 2 inches into the dirt under mulch behind a library in a low foot traffic area. Found in a garden at about 11:30 on September 20. It was about 82 degrees outside in the shade where it was found. |
Naming Notes | My future wife's name. :) |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 1250 |
Sanger Finishing Reactions | 3 |
Genome length (bp) | 42240 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | CCCGCCGCCTTGG |
GC Content | 66.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | N |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 70 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KF986246 |
Refseq Number | NC_023572 |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
37 |
Pitt Freezer Box Grid# |
54 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |