| Detailed Information for Phage Journey | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | mok226@lehigh.edu |
| Found By | Mokhinur Kodirova |
| Year Found | 2023 |
| Location Found | Bethleham, PA USA |
| Finding Institution | Lehigh University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 3°C |
| GPS Coordinates | 40.603027 N, 75.80618 W Map |
| Discovery Notes | Soil comes from university dorm - House 89, it was collected at 3:16pm, and was collected approximately 5cm below the surface. Soil contained mostly organic matter, and a little bit of sand with small twigs in it. |
| Naming Notes | I named my phage Journey because the journey that it took me to find my phage was meaningful, fun and the best part of everything I did. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1762 |
| Genome length (bp) | 41986 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CCCGCCGCAATGG |
| GC Content | 66.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | N |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAggie Andies BabeRuth Bosection6 Butters Carcharodon Charlie Chewbacca Duplicity Fulbright Gex Jamie19 Journey Kevin1 Magsby Melville MichelleMyBell Nenae Panchino Parmesanjohn PhancyPhin Philonius Phloss Phrann Pipsqueaks Purgamenstris Raymond7 Rebel Redi Rubeelu Schnauzer Scitech ShrimpFriedEgg Shweta Silvafighter Silvy SkinnyPete Smurph Snekmaggedon SpongeBob Tapioca Xeno Xerxes |
| Annotating Institution | Lehigh University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2024) |
| Plaque Notes | My plaque has turbid lysis with a diameter of 1mm. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJourney_Draft_1 Journey_Draft_2 Journey_Draft_3 Journey_Draft_4 Journey_Draft_5 Journey_Draft_6 Journey_Draft_7 Journey_Draft_8 Journey_Draft_9 Journey_Draft_10 Journey_Draft_11 Journey_Draft_12 Journey_Draft_13 Journey_Draft_14 Journey_Draft_15 Journey_Draft_16 Journey_Draft_17 Journey_Draft_18 Journey_Draft_19 Journey_Draft_20 Journey_Draft_21 Journey_Draft_22 Journey_Draft_23 Journey_Draft_24 Journey_Draft_25 Journey_Draft_26 Journey_Draft_27 Journey_Draft_28 Journey_Draft_29 Journey_Draft_30 Journey_Draft_31 Journey_Draft_32 Journey_Draft_33 Journey_Draft_34 Journey_Draft_35 Journey_Draft_36 Journey_Draft_38 Journey_Draft_39 Journey_Draft_40 Journey_Draft_41 Journey_Draft_42 Journey_Draft_43 Journey_Draft_44 Journey_Draft_45 Journey_Draft_46 Journey_Draft_47 Journey_Draft_48 Journey_Draft_49 Journey_Draft_50 Journey_Draft_51 Journey_Draft_52 Journey_Draft_53 Journey_Draft_54 Journey_Draft_55 Journey_Draft_56 Journey_Draft_57 Journey_Draft_58 Journey_Draft_59 Journey_Draft_60 Journey_Draft_61 Journey_Draft_62 Journey_Draft_63 Journey_Draft_64 Journey_Draft_65 Journey_Draft_66 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2.33 *10^10 |
| Pitt Freezer Box# | 186 |
| Pitt Freezer Box Grid# | D11 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
