Mycobacterium phage Schnauzer
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Detailed Information for Phage Schnauzer
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRiley Howe, Laney Scott, and Frederick Baliraine
Year Found2018
Location FoundLongview, TX USA
Finding InstitutionLeTourneau University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates32.522491 N, 94.700633 W Map
Discovery NotesDr. Baliraine obtained the soil sample in Longview, Texas, USA on Thursday, September 20, 2018 at 8:15 am. The weather was sunny but foggy, wind speeds were 3 mph, humidity was 100%, the barometric pressure was 29.94"Hg, and visibility was 10 miles. Dr. Baliraine was very generous and allowed Riley and Laney adopt this phage after repeated unsuccessful attempts to isolate a phage from the soil samples they collected.
Naming NotesRiley and Laney both have pet Schnauzers that are near and dear to their hearts. Schnauzers are known for being a stubborn breed. The phage that Riley and Laney isolated was also very stubborn.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage90
Genome length (bp)43700
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCCGCCGCAATGG
GC Content66.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionLeTourneau University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Schnauzer_1
(terminase, small subunit)

Schnauzer_2
(terminase, large subunit)

Schnauzer_3

Schnauzer_4
(portal protein)

Schnauzer_5
(capsid maturation protease)

Schnauzer_6
(major capsid protein)

Schnauzer_7

Schnauzer_8
(head-to-tail adaptor)

Schnauzer_9
(head-to-tail stopper)

Schnauzer_10

Schnauzer_11

Schnauzer_12
(tail terminator)

Schnauzer_13
(major tail protein)

Schnauzer_14
(tail assembly chaperone)

Schnauzer_15
(tail assembly chaperone)

Schnauzer_16
(tape measure protein)

Schnauzer_17
(minor tail protein)

Schnauzer_18
(minor tail protein)

Schnauzer_19
(minor tail protein)

Schnauzer_20
(minor tail protein)

Schnauzer_21

Schnauzer_22

Schnauzer_23

Schnauzer_24

Schnauzer_25

Schnauzer_26

Schnauzer_27

Schnauzer_28
(lysin A)

Schnauzer_29
(holin)

Schnauzer_30

Schnauzer_31

Schnauzer_32

Schnauzer_33
(antitoxin in toxin/antitoxin system, HicB-like)

Schnauzer_34

Schnauzer_35

Schnauzer_36
(tyrosine integrase)

Schnauzer_37
(immunity repressor)

Schnauzer_38
(excise)

Schnauzer_39

Schnauzer_40

Schnauzer_41

Schnauzer_42

Schnauzer_43

Schnauzer_44

Schnauzer_45

Schnauzer_46
(WhiB family transcription factor)

Schnauzer_47

Schnauzer_48
(RecE-like exonuclease)

Schnauzer_49
(RecT-like ssDNA binding protein)

Schnauzer_50
(Holliday junction resolvase)

Schnauzer_51
(NrdH-like glutaredoxin)

Schnauzer_52

Schnauzer_53
(helix-turn-helix DNA binding domain)

Schnauzer_54

Schnauzer_55

Schnauzer_56

Schnauzer_57

Schnauzer_58

Schnauzer_59

Schnauzer_60

Schnauzer_61

Schnauzer_62
(HNH endonuclease)

Schnauzer_63

Schnauzer_64

Schnauzer_65
(RepA-like replication initiator)

Schnauzer_66
(DnaC-like helicase loader)

Schnauzer_67

Schnauzer_68

Schnauzer_69
(helix-turn-helix DNA binding domain, MerR-like)

Schnauzer_70

Schnauzer_72

Schnauzer_73

Schnauzer_74
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT723932
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 85
Pitt Freezer Box Grid# C12
Available Files
EM PictureDownload
GenBank File for PhameratorDownload