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Mycobacterium phage ShrimpFriedEgg
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Detailed Information for Phage ShrimpFriedEgg
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLonghui Gao
Year Found2018
Location FoundBethlehem, PA USA
Finding InstitutionLehigh University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.605002 N, 75.378306 W Map
Discovery Notes-collected under a tree outside of Taylor House at Lehigh University
-collected on January 22, 2018 at 5:43 pm after some light rainfall
-the soil was dark, damp and has some twigs inside
-the temperature was around 10 Celsius degrees
Naming NotesMy favorite dish is shrimp fried egg with rice.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 7, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1811
Genome length (bp)42594
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCCGCCGCCTTGG
GC Content66.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionLehigh University
Annotation StatusIn GenBank
Plaque NotesThe head to tail ratio is approximately 1:2.7.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

ShrimpFriedEgg_1

ShrimpFriedEgg_2
(terminase)

ShrimpFriedEgg_3

ShrimpFriedEgg_4
(portal protein)

ShrimpFriedEgg_5
(capsid maturation protease)

ShrimpFriedEgg_6
(major capsid protein)

ShrimpFriedEgg_7

ShrimpFriedEgg_8
(head-to-tail connector complex protein)

ShrimpFriedEgg_9
(head-to-tail stopper)

ShrimpFriedEgg_10

ShrimpFriedEgg_11

ShrimpFriedEgg_12
(tail terminator)

ShrimpFriedEgg_13
(major tail protein)

ShrimpFriedEgg_14
(tail assembly chaperone)

ShrimpFriedEgg_15
(tail assembly chaperone)

ShrimpFriedEgg_16
(tape measure protein)

ShrimpFriedEgg_17
(minor tail protein)

ShrimpFriedEgg_18
(minor tail protein)

ShrimpFriedEgg_19
(minor tail protein)

ShrimpFriedEgg_20
(minor tail protein)

ShrimpFriedEgg_21
(minor tail protein)

ShrimpFriedEgg_22

ShrimpFriedEgg_23

ShrimpFriedEgg_24

ShrimpFriedEgg_25
(lysin A)

ShrimpFriedEgg_26
(holin)

ShrimpFriedEgg_27

ShrimpFriedEgg_28

ShrimpFriedEgg_29

ShrimpFriedEgg_30

ShrimpFriedEgg_31

ShrimpFriedEgg_32

ShrimpFriedEgg_33
(HicB-like antitoxin)

ShrimpFriedEgg_34
(HicA-like toxin)

ShrimpFriedEgg_35

ShrimpFriedEgg_36
(membrane protein)

ShrimpFriedEgg_37
(integrase)

ShrimpFriedEgg_38
(immunity repressor)

ShrimpFriedEgg_39
(excise)

ShrimpFriedEgg_40

ShrimpFriedEgg_41

ShrimpFriedEgg_42

ShrimpFriedEgg_43

ShrimpFriedEgg_44

ShrimpFriedEgg_45

ShrimpFriedEgg_46

ShrimpFriedEgg_47

ShrimpFriedEgg_48

ShrimpFriedEgg_49
(WhiB family transcription factor)

ShrimpFriedEgg_50

ShrimpFriedEgg_51
(RecE-like exonuclease)

ShrimpFriedEgg_52
(RecT-like ssDNA binding protein)

ShrimpFriedEgg_53

ShrimpFriedEgg_54
(RusA-like resolvase)

ShrimpFriedEgg_55
(NrdH-like glutaredoxin)

ShrimpFriedEgg_56

ShrimpFriedEgg_57

ShrimpFriedEgg_58

ShrimpFriedEgg_59

ShrimpFriedEgg_60

ShrimpFriedEgg_61
(helix-turn-helix DNA binding domain protein)

ShrimpFriedEgg_62

ShrimpFriedEgg_63

ShrimpFriedEgg_64

ShrimpFriedEgg_65

ShrimpFriedEgg_66

ShrimpFriedEgg_67

ShrimpFriedEgg_68

ShrimpFriedEgg_69

ShrimpFriedEgg_70
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK524528
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8e12
Pitt Freezer Box# 84
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload