Gordonia phage Outis
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Detailed Information for Phage Outis
Discovery Information
Isolation HostGordonia terrae 3612
Found ByNathaniel Skolfield, Hannah Higgins
Year Found2022
Location FoundOrono, ME United States of America
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature27°C
GPS Coordinates44.89765 N, 68.66733 W Map
Naming NotesNamed after the name Odysseus used to trick the cyclops, meaning "Nobody". We named our phage this due to the difficulty we had in discovering where our phage came from.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage274
Genome length (bp)68128
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Number of Genes92
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Outis_1
(terminase small subunit)

Outis_2

Outis_3

Outis_4

Outis_5

Outis_6

Outis_7
(HicA-like toxin)

Outis_8

Outis_9

Outis_10

Outis_11

Outis_12

Outis_13

Outis_14

Outis_15

Outis_16

Outis_17

Outis_18

Outis_19
(lysin B)

Outis_20

Outis_21
(hydrolase)

Outis_22

Outis_23

Outis_24
(HNH endonuclease)

Outis_25
(terminase large subunit)

Outis_26
(portal protein)

Outis_27

Outis_28
(scaffolding protein)

Outis_29
(LamD-like capsid decoration protein)

Outis_30
(major capsid protein)

Outis_31

Outis_32
(head-to-tail adaptor)

Outis_33
(head-to-tail stopper)

Outis_34

Outis_35
(tail terminator)

Outis_36
(major tail protein)

Outis_37

Outis_38
(tail assembly chaperone)

Outis_39
(tail assembly chaperone)

Outis_40
(tape measure protein)

Outis_41
(minor tail protein)

Outis_42
(minor tail protein)

Outis_43
(minor tail protein)

Outis_44
(minor tail protein)

Outis_45

Outis_46
(minor tail protein)

Outis_47

Outis_48

Outis_49
(lysin A, protease C39 domain)

Outis_50
(lysin A, glycosyl hydrolase domain)

Outis_51
(holin)

Outis_52

Outis_53

Outis_54
(DNA primase/polymerase/helicase)

Outis_55

Outis_56
(WhiB family transcription factor)

Outis_57

Outis_58
(helix-turn-helix DNA binding domain protein)

Outis_59
(RuvC-like resolvase)

Outis_60

Outis_61
(DnaE-like DNA polymerase III alpha)

Outis_62

Outis_63

Outis_64

Outis_65

Outis_66
(RecA superfamily ATPase)

Outis_67
(Cas4 family exonuclease)

Outis_68

Outis_69

Outis_70

Outis_71

Outis_72

Outis_73
(DNA helicase)

Outis_74
(WhiB family transcription factor)

Outis_75

Outis_76

Outis_77

Outis_78

Outis_79

Outis_80

Outis_81

Outis_82

Outis_83

Outis_84

Outis_85

Outis_86

Outis_87

Outis_88

Outis_89

Outis_90

Outis_91

Outis_92

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR159651
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 163
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload