| Detailed Information for Phage Phrann |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Amanda Sciola |
| Year Found | 2014 |
| Location Found | New Haven, CT USA |
| Finding Institution | Southern Connecticut State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 42°C |
| GPS Coordinates | 41.333611 N, 72.9525 W Map |
| Discovery Notes | Temperature: 67°F
Soil Depth: Surface-level
Ave capsid width (nm) = 61.39 +/- 0.938
Ave tail length (nm) = 172.19 +/- 4.31 |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 7, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 9057 |
| Genome length (bp) | 44872 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CCCGCCGCCTTGG |
| GC Content | 66.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | N |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 67 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU935731 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2014SCSUphrannAS |
| SEA Lysate Titer |
5.2x10^10 |
| Date of SEA Lysate Titering |
Oct 23, 2014 |
| Pitt Freezer Box# |
10 |
| Pitt Freezer Box Grid# |
B10 |
| Available Files |
| Final DNAMaster File | Download |