| Detailed Information for Phage Redi |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Kathleen Hafer |
| Year Found | 2009 |
| Location Found | St. Louis, MO USA |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.669694 N, 90.383833 W Map |
| Discovery Notes | Suburban yard in Olivette Missouri. Suburban backyard bark much pile. Soil depth 2-3cm. Temperature 70 degrees Celsius. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 28, 2011 |
| Genome length (bp) | 42594 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CCCGCCGCCTTGG |
| GC Content | 66.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | N |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | 1.5mm/ clear middle with blurry edges/ Incubation 48 hours at 37 degrees Celsius. |
| Morphotype | Siphoviridae |
| Number of Genes | 69 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | JN624851 |
| Refseq Number | NC_023730 |
| Published in Paper | Hatfull et al 2012, Journal of Virology: Complete genome sequences of 138 mycobacteriophages |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2009WUSLrediSE |
| SEA Lysate Titer |
8.2e10 |
| Pitt Freezer Box# |
10 |
| Pitt Freezer Box Grid# |
13 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
