| Detailed Information for Phage Schnauzer |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Riley Howe, Laney Scott, and Frederick Baliraine |
| Year Found | 2018 |
| Location Found | Longview, TX USA |
| Finding Institution | LeTourneau University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 32.522491 N, 94.700633 W Map |
| Discovery Notes | Dr. Baliraine obtained the soil sample in Longview, Texas, USA on Thursday, September 20, 2018 at 8:15 am. The weather was sunny but foggy, wind speeds were 3 mph, humidity was 100%, the barometric pressure was 29.94"Hg, and visibility was 10 miles. Dr. Baliraine was very generous and allowed Riley and Laney adopt this phage after repeated unsuccessful attempts to isolate a phage from the soil samples they collected. |
| Naming Notes | Riley and Laney both have pet Schnauzers that are near and dear to their hearts. Schnauzers are known for being a stubborn breed. The phage that Riley and Laney isolated was also very stubborn. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 29, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 90 |
| Genome length (bp) | 43700 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 13 bases |
| Overhang Sequence | CCCGCCGCAATGG |
| GC Content | 66.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | N |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | LeTourneau University |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 73 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT723932 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
85 |
| Pitt Freezer Box Grid# |
C12 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
