| Detailed Information for Phage Shivanishola |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Olusola Alege and Shivani Patel |
| Year Found | 2021 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.444372 N, 79.949038 W Map |
| Discovery Notes | Sample code: E; Direct Isolation #5:
Location (general descriptor): Outside of Forbes-Craig Apartment, under a tree. An inch below the surface was collected.
Date and time of collection: 09/19/2021 9:37 am.
GPS coordinates: (40.4443723, -79.9490383)
Any observation you noticed at time of collection: Dirt is very dry, sample includes a leaf and mulch. The dirt was very compact and dry so difficult to dig and the sample includes surface dirt. |
| Naming Notes | The name came from combining Olusola's nickname with Shivani's first name. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 11, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 3103 |
| Genome length (bp) | 57573 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | turbid |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP434456 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1X10^10 |
| Pitt Freezer Box# |
141 |
| Pitt Freezer Box Grid# |
G9 |
| Available Files |
| GenBank File for Phamerator | Download |