Gordonia phage Sitar
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Detailed Information for Phage Sitar | |
Discovery Information | |
Isolation Host | Gordonia terrae NRRL B-16283 |
Found By | Matthew Montgomery |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.440979 N, 79.945574 W Map |
Naming Notes | A sitar is a cool string instrument from India that I think is interesting. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 1, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 780 |
Genome length (bp) | 59641 |
Character of genome ends | Circularly Permuted |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 84 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MH153809 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 96 |
Pitt Freezer Box Grid# | F4 |
Available Files | |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |