| Detailed Information for Phage Stultus |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Jenna Li |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.442363 N, 79.79075 W Map |
| Discovery Notes | Phage was found under a urban planted tree across from towers between South Bouquet Street and Fifth Avenue.
Soil Condition:
The soil is very hard due to the cold
There is two day old snow on top of the soil
The sample is gathered from the very top of the soil dug from the edges of where the snow has started to melt
The soil is a collection of mulch, hair and soil (with other indistinguishable bits)
Outside Weather Conditions:
Temperature is below freezing
Slightly windy
The past several days have been below freezing
1/5/17 it had snowed
Vegetation:
Small to medium tree is planted nearby |
| Naming Notes | Stultus in latin means "foolish". |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 16, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2037 |
| Genome length (bp) | 57916 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | No apparent lysogenic behavior. |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Clear, small, round plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 80 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH976518 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
56 |
| Pitt Freezer Box Grid# |
E1 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
