Detailed Information for Phage Sukkupi |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Agnes M. Cotto-Pereira |
Year Found | 2017 |
Location Found | Gurabo, PR USA |
Finding Institution | University of Puerto Rico at Cayey |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 18.227222 N, 66.000833 W Map |
Discovery Notes | Found in a humid area in house backyard. |
Naming Notes | From a pet dog. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 28, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1545 |
Genome length (bp) | 66184 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCCGCGTAC |
GC Content | 66.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CR |
Subcluster | CR4 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Puerto Rico at Cayey |
Annotation Status | In GenBank |
Plaque Notes | Clear plaques |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN369753 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
72 |
Pitt Freezer Box Grid# |
F7 |
Available Files |
GenBank File for Phamerator | Download |