Gordonia phage Tracker
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Detailed Information for Phage Tracker
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByYinghan Qiu
Year Found2019
Location FoundRaleigh, NC USA
Finding InstitutionDurham Technical Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates35.976111 N, 78.880528 W Map
Discovery NotesThe sample was collected at the corner of the Durham Tech parking lot.
Naming NotesThe name is the name I always use my internet name.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 22, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage75
Genome length (bp)66607
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionDurham Technical Community College
Annotation StatusIn GenBank
Plaque NotesSize:

Head Size: 60nm

Tail Size: 275nm

Titer: 2.82E+09
MorphotypeSiphoviridae
Number of Genes92
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Tracker_1

Tracker_2

Tracker_3

Tracker_4

Tracker_5

Tracker_6

Tracker_7

Tracker_8

Tracker_9
(HicA-like toxin)

Tracker_10

Tracker_11

Tracker_12

Tracker_13

Tracker_14

Tracker_15

Tracker_16

Tracker_17

Tracker_18

Tracker_19
(lysin B)

Tracker_20

Tracker_21

Tracker_22

Tracker_23
(HNH endonuclease)

Tracker_24
(terminase)

Tracker_25
(portal protein)

Tracker_26

Tracker_27
(scaffolding protein)

Tracker_28
(LamD-like capsid decoration protein)

Tracker_29
(major capsid protein)

Tracker_30

Tracker_31
(head-to-tail adaptor)

Tracker_32
(head-to-tail stopper)

Tracker_33

Tracker_34
(tail terminator)

Tracker_35
(major tail protein)

Tracker_36

Tracker_37
(tail assembly chaperone)

Tracker_38
(tail assembly chaperone)

Tracker_39
(tape measure protein)

Tracker_40
(minor tail protein)

Tracker_41
(minor tail protein)

Tracker_42
(minor tail protein)

Tracker_43
(minor tail protein)

Tracker_44

Tracker_45

Tracker_46

Tracker_47
(lysin A, protease C39 domain)

Tracker_48
(lysin A, glycosyl hydrolase domain)

Tracker_49

Tracker_50

Tracker_51

Tracker_52
(DNA primase/polymerase/helicase)

Tracker_53

Tracker_54
(WhiB family transcription factor)

Tracker_55

Tracker_56
(helix-turn-helix DNA binding domain protein)

Tracker_57
(RuvC-like resolvase)

Tracker_58

Tracker_59

Tracker_60
(DnaE-like DNA polymerase III alpha)

Tracker_61

Tracker_62

Tracker_63
(thioredoxin)

Tracker_64

Tracker_65
(AAA-ATPase)

Tracker_66
(Cas4 family exonuclease)

Tracker_67

Tracker_68

Tracker_69

Tracker_70

Tracker_71

Tracker_72
(DNA helicase)

Tracker_73
(WhiB family transcription factor)

Tracker_74

Tracker_75

Tracker_76

Tracker_77

Tracker_78

Tracker_79

Tracker_80

Tracker_81

Tracker_82

Tracker_83

Tracker_84

Tracker_85

Tracker_86

Tracker_87

Tracker_88

Tracker_89

Tracker_90

Tracker_91

Tracker_93

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ622178
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 107
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload