| Detailed Information for Phage Turuncu |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Raelys L. DeLeon-Fernandez |
| Year Found | 2016 |
| Location Found | San Juan, PR Puerto Rico |
| Finding Institution | University of Puerto Rico at Cayey |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 18.1956 N, 66.02122 W Map |
| Discovery Notes | Semi Humid
Partly Cloudy |
| Naming Notes | Orange in Turkish |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 16, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1864 |
| Genome length (bp) | 66808 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCCGCGTAC |
| GC Content | 65.4% |
| Sequencing Notes | There were two slight variations seen in the sequencing reads for this genome.
About 40% of the population has an "A" instead of the called "C" at position 35059.
Also about 40% of the population has a fifth G in the run of Gs beginning at 53722, instead of the called 4 Gs. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CR |
| Subcluster | CR1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Puerto Rico at Cayey |
| Annotation Status | In GenBank |
| Plaque Notes | Clear Small |
| Number of Genes | 94 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH744424 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
2.33 X 10^11 |
| Pitt Freezer Box# |
46 |
| Pitt Freezer Box Grid# |
B8 |
| Available Files |
| GenBank File for Phamerator | Download |