Gordonia phage ViaConlectus
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Detailed Information for Phage ViaConlectus
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDaniel Ortiz, Juan Maravilla
Year Found2021
Location FoundCrete, NE United States
Finding InstitutionDoane University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.629292 N, 92.951907 W Map
Discovery NotesIt was able to create plaques even when there was contamination mixed with the phage.
Naming NotesSearched for Latin words of the area where it was found ( rain puddle). Latin word for rain is Via and Latin word for puddle is Conlectus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 12, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage611
Genome length (bp)58888
Character of genome endsCircularly Permuted
GC Content67.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionDoane University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes88
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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ViaConlectus_1
(terminase small subunit)

ViaConlectus_2
(terminase large subunit)

ViaConlectus_3

ViaConlectus_4

ViaConlectus_5

ViaConlectus_6

ViaConlectus_7

ViaConlectus_8

ViaConlectus_9

ViaConlectus_10

ViaConlectus_11

ViaConlectus_12

ViaConlectus_13

ViaConlectus_14
(portal protein)

ViaConlectus_15

ViaConlectus_16

ViaConlectus_17
(ribosome modulation factor)

ViaConlectus_18

ViaConlectus_19
(RNA ligase)

ViaConlectus_20

ViaConlectus_21

ViaConlectus_22
(major capsid hexamer protein)

ViaConlectus_23

ViaConlectus_24

ViaConlectus_25
(major tail protein)

ViaConlectus_26
(head-to-tail adaptor)

ViaConlectus_27

ViaConlectus_28

ViaConlectus_29

ViaConlectus_30
(tail assembly chaperone)

ViaConlectus_31
(tail assembly chaperone)

ViaConlectus_32

ViaConlectus_33
(tape measure protein)

ViaConlectus_34
(minor tail protein)

ViaConlectus_35
(minor tail protein)

ViaConlectus_36

ViaConlectus_37

ViaConlectus_38

ViaConlectus_39

ViaConlectus_40
(minor tail protein)

ViaConlectus_41

ViaConlectus_42
(lysin A)

ViaConlectus_43
(holin)

ViaConlectus_44

ViaConlectus_45

ViaConlectus_46
(lysin B)

ViaConlectus_47

ViaConlectus_48

ViaConlectus_49

ViaConlectus_50
(RecE-like endonuclease)

ViaConlectus_51
(RecT-like DNA pairing protein)

ViaConlectus_52

ViaConlectus_53

ViaConlectus_54
(helix-turn-helix DNA binding domain protein)

ViaConlectus_55
(helix-turn-helix DNA binding domain protein)

ViaConlectus_56
(RepA-like replication initiator)

ViaConlectus_57

ViaConlectus_58

ViaConlectus_59

ViaConlectus_60

ViaConlectus_61
(ASC-1 transcription coactivator)

ViaConlectus_62

ViaConlectus_63

ViaConlectus_64

ViaConlectus_65
(RuvC-like resolvase)

ViaConlectus_66

ViaConlectus_67

ViaConlectus_68

ViaConlectus_69

ViaConlectus_70

ViaConlectus_71

ViaConlectus_72

ViaConlectus_73

ViaConlectus_74

ViaConlectus_75

ViaConlectus_76

ViaConlectus_77

ViaConlectus_78

ViaConlectus_79

ViaConlectus_80
(DnaQ-like DNA polymerase III subunit)

ViaConlectus_81

ViaConlectus_82

ViaConlectus_83

ViaConlectus_84

ViaConlectus_85

ViaConlectus_86

ViaConlectus_87
(DNA binding protein)

ViaConlectus_88
(DNA methyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP068342
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 163
Pitt Freezer Box Grid# G3
Available Files
GenBank File for PhameratorDownload