Detailed Information for Phage Vivi2 |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Michael E. Bortz |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 20°C |
GPS Coordinates | 40.443967 N, 79.957511 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 12, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 673 |
Genome length (bp) | 59337 |
Character of genome ends | Circularly Permuted |
GC Content | 67.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | 300 nm tail icosahedral head |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | 1-2 mm diameter |
Morphotype | Siphoviridae |
Number of Genes | 89 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU963250 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
A9 |
Available Files |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |