Mycobacterium phage ProfessorX
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Detailed Information for Phage ProfessorX
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKahreign Joseph & Leandra Yarrell
Year Found2014
Location FoundHaverstraw, NY United States of America
Finding InstitutionNyack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates41.197566 N, 73.961594 W Map
Discovery NotesThe soil sample was retrieved from a back yard in Haverstraw, NY. The sample was three inches deep from the ground.
Naming NotesWe agreed upon this name because we both enjoy Xmen movies.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage5682
Genome length (bp)68086
Character of genome endsCircularly Permuted
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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Alis (None)

Azarath (None)

BlaqueIvy (None)

Cally (None)

Ceci11 (None)

ChrIke (None)

Conway (None)

CptKIRK (None)

DaHileesi (None)

Kerrigan (None)

LilMcDreamy (None)

Loadofcarp (None)

Mage (None)

Meraxes (None)

Muus (None)

Olive00 (None)

Pallavicini (None)

RoseLilly (None)

SeTi1 (None)

Skye (None)

Themis (None)

Thonko (None)

TommyBoy (None)

ABU (B1)

Alex (B1)

AltPhacts (B1)

Altwerkus (B1)

Apizium (B1)

ArigunDD10 (B1)

Ashraf (B1)

AstrumP28 (B1)

AyJay1824 (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

BengaliBalla92 (B1)

Beni05 (B1)

Bishoperium (B1)

BlackStallion (B1)

BRod943 (B1)

Buckeye (B1)

BullsEye (B1)

CamL (B1)

Cannibal (B1)

Ceraveeno (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Coffean (B1)

Colbert (B1)

Cold1 (B1)

Cosmolli16 (B1)

Cowgirl (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Ditto (B1)

Doc (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

DuffyC (B1)

Durga (B1)

Egahp (B1)

EmmyMG (B1)

EmpTee (B1)

Eremos (B1)

Fang (B1)

Ferhersher (B1)

FluffyNinja (B1)

Frankicide (B1)

FriarPreacher (B1)

Fringe (B1)

Frogger (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Giddykiddy (B1)

Girly (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Inkblot (B1)

IPP (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jbone (B1)

Jillium (B1)

Josephine (B1)

Kahve (B1)

Kailash (B1)

Kat63 (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

Lauryn (B1)

LeeLot (B1)

Legion (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Lifestyle (B1)

Llorona (B1)

Longacauda (B1)

LoveandHonor (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Maleldil (B1)

Malkin71 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

Mistert4 (B1)

MitKao (B1)

Morbach (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Novak (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

Pacos19 (B1)

PDRPv (B1)

Pearsonia (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Pickrel13 (B1)

Piglet (B1)

PinheadLarry (B1)

PinkLady16 (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prann (B1)

ProfessorX (B1)

Puhltonio (B1)

PuraVida (B1)

Pyro (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Rolex (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

Scooterbug (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Speckles (B1)

Squid (B1)

Squiggle (B1)

Squirt12 (B1)

Steve27 (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Tigris (B1)

Timmi (B1)

TomBombadil (B1)

Tre (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

Ulysses2016 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vivamus (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Wunderlich (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Ypsitucky (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Arbiter (B2)

Ares (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Julius (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

CharlesTrout (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Gulsi (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Littleengine (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

OrangeOswald (B3)

Phaedrus (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

RomaT (B3)

SassBadger (B3)

Tydolla (B3)

Yahalom (B3)

Zollars18 (B3)

Adawi (B4)

AlanGrant (B4)

Bane1 (B4)

Bane2 (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Halloween (B4)

Hangman (B4)

JAMaL (B4)

LeapingLizzy (B4)

Nigel (B4)

Paliothales9 (B4)

RawrgerThat (B4)

Skruzzles (B4)

Stinger (B4)

TheRipper (B4)

Tvorc (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Larry28 (B7)

Saguaro (B7)

Tapir (B7)

Annotation StatusIn GenBank
Plaque NotesDuring the experiment, the phage appeared to be clear and lytic.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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ProfessorX_1
(terminase small subunit)

ProfessorX_2
(terminase large subunit)

ProfessorX_3

ProfessorX_4

ProfessorX_5

ProfessorX_6
(resolvase)

ProfessorX_7
(membrane protein)

ProfessorX_8
(portal protein)

ProfessorX_9
(capsid morphogenesis protein)

ProfessorX_10
(HNH endonuclease)

ProfessorX_11

ProfessorX_12
(major capsid protein)

ProfessorX_13

ProfessorX_14

ProfessorX_15
(holin)

ProfessorX_16
(membrane protein)

ProfessorX_17
(membrane protein)

ProfessorX_18
(major tail protein)

ProfessorX_19

ProfessorX_20
(queuine tRNA-ribosyltransferase)

ProfessorX_21

ProfessorX_22
(head-to-tail connector complex protein)

ProfessorX_23

ProfessorX_24

ProfessorX_25
(tail protein)

ProfessorX_26

ProfessorX_27

ProfessorX_28
(tapemeasure protein)

ProfessorX_29
(minor tail protein)

ProfessorX_30
(minor tail protein)

ProfessorX_31
(minor tail protein)

ProfessorX_32
(minor tail protein)

ProfessorX_33
(minor tail protein)

ProfessorX_34

ProfessorX_35

ProfessorX_36

ProfessorX_37

ProfessorX_38

ProfessorX_39

ProfessorX_40

ProfessorX_41

ProfessorX_42

ProfessorX_43

ProfessorX_44
(membrane protein)

ProfessorX_45
(excise)

ProfessorX_46
(helix-turn-helix DNA binding domain protein)

ProfessorX_47

ProfessorX_48
(lysin A)

ProfessorX_49
(lysin B)

ProfessorX_50

ProfessorX_51
(exonuclease)

ProfessorX_52
(helicase)

ProfessorX_53

ProfessorX_54

ProfessorX_55

ProfessorX_56

ProfessorX_57
(DNA primase/polymerase)

ProfessorX_58
(membrane protein)

ProfessorX_59

ProfessorX_60
(DNA polymerase I)

ProfessorX_61

ProfessorX_62

ProfessorX_63
(membrane protein)

ProfessorX_64

ProfessorX_65

ProfessorX_66
(ribbon-helix-helix DNA binding domain protein)

ProfessorX_67

ProfessorX_68
(RNaseE)

ProfessorX_69

ProfessorX_70

ProfessorX_71

ProfessorX_72

ProfessorX_73
(helix-turn-helix DNA binding domain protein)

ProfessorX_74

ProfessorX_75

ProfessorX_76

ProfessorX_77

ProfessorX_78

ProfessorX_79
(membrane protein)

ProfessorX_80

ProfessorX_81

ProfessorX_82
(HNH endonuclease)

ProfessorX_83

ProfessorX_84

ProfessorX_85

ProfessorX_86

ProfessorX_87

ProfessorX_88

ProfessorX_89

ProfessorX_90

ProfessorX_91

ProfessorX_92

ProfessorX_93

ProfessorX_94

ProfessorX_95
(membrane protein)

ProfessorX_96

ProfessorX_97

ProfessorX_98

ProfessorX_99

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG962375
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.7 x 10^9 pfu/ml
Date of SEA Lysate Titering Nov 17, 2014
Pitt Freezer Box# 8
Pitt Freezer Box Grid# H6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload