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Mycobacterium phage Virapocalypse
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Detailed Information for Phage Virapocalypse
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAyush Parikh
Year Found2015
Location FoundPhiladelphia, PA United States
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature21°C
GPS Coordinates39.959694 N, 75.190694 W Map
Discovery NotesFound specifically on September 22nd at 7:05 P.M. Found at soil depth of 5 inches in warm, moist, and relatively loose soil (70 Degrees F).
Naming NotesThe name is derived from the large number of phage species present on Earth (and the word apocalypse)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 14, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage882
Genome length (bp)68682
Character of genome endsCircularly Permuted
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Other Cluster Members

Click to View

Alis (None)

Azarath (None)

BlaqueIvy (None)

Cally (None)

Ceci11 (None)

ChrIke (None)

Conway (None)

CptKIRK (None)

DaHileesi (None)

Kerrigan (None)

Loadofcarp (None)

Mage (None)

Meraxes (None)

Muus (None)

Olive00 (None)

Pallavicini (None)

RoseLilly (None)

SeTi1 (None)

Skye (None)

Themis (None)

ABU (B1)

Alex (B1)

AltPhacts (B1)

Altwerkus (B1)

APE308 (B1)

Apizium (B1)

ArigunDD10 (B1)

Ashraf (B1)

AstrumP28 (B1)

AyJay1824 (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

BengaliBalla92 (B1)

Beni05 (B1)

BlackStallion (B1)

BRod943 (B1)

Buckeye (B1)

BullsEye (B1)

Cannibal (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Coffean (B1)

Colbert (B1)

Cold1 (B1)

Cosmolli16 (B1)

Cowgirl (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Ditto (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

DuffyC (B1)

Durga (B1)

Egahp (B1)

EmmyMG (B1)

EmpTee (B1)

Eremos (B1)

Fang (B1)

Ferhersher (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

Frogger (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Giddykiddy (B1)

Girly (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Horchata (B1)

ImtiyazSitla (B1)

Inkblot (B1)

IPP (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JangoPhett (B1)

Jbone (B1)

Jillium (B1)

Josephine (B1)

Kailash (B1)

Kat63 (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Legion (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LoveandHonor (B1)

LuckyMarjie (B1)

Lulu100 (B1)

Lulumae (B1)

Mag7 (B1)

Malkin71 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Megatron (B1)

Mesh1 (B1)

Mikota (B1)

Mistert4 (B1)

MitKao (B1)

Morbach (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Novak (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

Pacos19 (B1)

PDRPv (B1)

Pearsonia (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Pickrel13 (B1)

Piglet (B1)

PinkLady16 (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prann (B1)

ProfessorX (B1)

Puhltonio (B1)

PuraVida (B1)

Pyro (B1)

RedMaple (B1)

Rfink25 (B1)

Riggan (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

Scooterbug (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Speckles (B1)

Squid (B1)

Squiggle (B1)

Squirt12 (B1)

Steve27 (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Tigris (B1)

Timmi (B1)

TomBombadil (B1)

Tre (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

Ulysses2016 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vivamus (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Wunderlich (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Ypsitucky (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Arbiter (B2)

Ares (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Julius (B2)

Kheth (B2)

Laurie (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Rstan (B2)

Sabella (B2)

TA17A (B2)

Tinciduntsolum (B2)

Tres (B2)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

CharlesTrout (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Gulsi (B3)

Heathcliff (B3)

Kamiyu (B3)

Littleengine (B3)

Mortcellus (B3)

NOZO (B3)

OrangeOswald (B3)

Phaedrus (B3)

Phlyer (B3)

Pipefish (B3)

RomaT (B3)

SassBadger (B3)

Yahalom (B3)

Zollars18 (B3)

Adawi (B4)

AlanGrant (B4)

Bane1 (B4)

Bane2 (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Halloween (B4)

JAMaL (B4)

LeapingLizzy (B4)

Nigel (B4)

Paliothales9 (B4)

RawrgerThat (B4)

Skruzzles (B4)

Stinger (B4)

TheRipper (B4)

Tvorc (B4)

Vincenzo (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Saguaro (B7)

Plaque NotesCircular, clear, 4 mm. plaques. Moderate growth pattern.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Virapocalypse_1
(terminase, small subunit)

Virapocalypse_2
(terminase, large subunit)

Virapocalypse_3

Virapocalypse_4

Virapocalypse_5

Virapocalypse_6
(RuvC resolvase)

Virapocalypse_7
(membrane protein)

Virapocalypse_8
(portal protein)

Virapocalypse_9
(capsid morphogenesis protein)

Virapocalypse_10
(HNH endonuclease)

Virapocalypse_11

Virapocalypse_12
(major capsid protein)

Virapocalypse_13

Virapocalypse_14

Virapocalypse_15

Virapocalypse_16

Virapocalypse_17

Virapocalypse_18
(major tail protein)

Virapocalypse_19

Virapocalypse_20
(queuine tRNA ribosyltransferase)

Virapocalypse_21

Virapocalypse_22

Virapocalypse_23

Virapocalypse_24

Virapocalypse_25

Virapocalypse_26

Virapocalypse_27

Virapocalypse_28
(tape measure protein)

Virapocalypse_29
(minor tail protein)

Virapocalypse_30
(minor tail protein)

Virapocalypse_31
(minor tail protein)

Virapocalypse_32
(minor tail protein)

Virapocalypse_33
(minor tail protein)

Virapocalypse_34

Virapocalypse_35

Virapocalypse_36

Virapocalypse_37

Virapocalypse_38

Virapocalypse_39

Virapocalypse_40

Virapocalypse_41

Virapocalypse_42

Virapocalypse_43

Virapocalypse_44

Virapocalypse_45
(helix-turn-helix DNA binding domain)

Virapocalypse_46
(helix-turn-helix DNA binding domain)

Virapocalypse_47

Virapocalypse_48
(lysin A)

Virapocalypse_49
(lysin B)

Virapocalypse_50

Virapocalypse_51
(nuclease)

Virapocalypse_52
(helicase)

Virapocalypse_53

Virapocalypse_54

Virapocalypse_55

Virapocalypse_56

Virapocalypse_57

Virapocalypse_58

Virapocalypse_59
(DNA primase/polymerase)

Virapocalypse_60

Virapocalypse_61
(DNA polymerase I)

Virapocalypse_62

Virapocalypse_63

Virapocalypse_64

Virapocalypse_65

Virapocalypse_66

Virapocalypse_67

Virapocalypse_68

Virapocalypse_69

Virapocalypse_70

Virapocalypse_71
(RNaseE endoribonuclease)

Virapocalypse_72

Virapocalypse_73

Virapocalypse_74
(phospholipase A2 domain)

Virapocalypse_75

Virapocalypse_76
(helix-turn-helix DNA binding domain)

Virapocalypse_77

Virapocalypse_78

Virapocalypse_79

Virapocalypse_80

Virapocalypse_81

Virapocalypse_82

Virapocalypse_83

Virapocalypse_84

Virapocalypse_85
(HNH endonuclease)

Virapocalypse_86

Virapocalypse_87

Virapocalypse_88

Virapocalypse_89

Virapocalypse_90

Virapocalypse_91

Virapocalypse_92

Virapocalypse_93

Virapocalypse_94

Virapocalypse_95

Virapocalypse_96

Virapocalypse_97

Virapocalypse_98

Virapocalypse_99

Virapocalypse_100

Virapocalypse_101

Virapocalypse_102

Virapocalypse_103

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF919539
Refseq NumberNone yet
Available Files
Restriction Digest PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload