Mycobacterium phage Gyarad
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Detailed Information for Phage Gyarad
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesGyarad05
Found ByKara Ladle
Year Found2009
Location FoundProvo, UT USA
Finding InstitutionBrigham Young University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.246 N, 111.649 W Map
Discovery NotesDate: 1 Sep 2009
Temp: 27°C
Site: BYU Campus, topsoil sample, mulch. By bike rack south of the Widstoe Building
Sample: <1 in.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 13, 2012
Sequencing FacilityBYU DNA Sequencing Center
Shotgun Sequencing Method454 Pyrosequencing
Genome length (bp)68004
Character of genome endsCircularly Permuted
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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Alis (None)

Azarath (None)

BlaqueIvy (None)

Cally (None)

Ceci11 (None)

ChrIke (None)

Conway (None)

CptKIRK (None)

DaHileesi (None)

Kerrigan (None)

LilMcDreamy (None)

Loadofcarp (None)

Mage (None)

Meraxes (None)

Muus (None)

Olive00 (None)

Pallavicini (None)

RoseLilly (None)

SeTi1 (None)

Skye (None)

Themis (None)

Thonko (None)

TommyBoy (None)

ABU (B1)

Alex (B1)

AltPhacts (B1)

Altwerkus (B1)

Apizium (B1)

ArigunDD10 (B1)

Ashraf (B1)

AstrumP28 (B1)

AyJay1824 (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

BengaliBalla92 (B1)

Beni05 (B1)

Bishoperium (B1)

BlackStallion (B1)

BRod943 (B1)

Buckeye (B1)

BullsEye (B1)

CamL (B1)

Cannibal (B1)

Ceraveeno (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Coffean (B1)

Colbert (B1)

Cold1 (B1)

Cosmolli16 (B1)

Cowgirl (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Ditto (B1)

Doc (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

DuffyC (B1)

Durga (B1)

Egahp (B1)

EmmyMG (B1)

EmpTee (B1)

Eremos (B1)

Fang (B1)

Ferhersher (B1)

FluffyNinja (B1)

Frankicide (B1)

FriarPreacher (B1)

Fringe (B1)

Frogger (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Giddykiddy (B1)

Girly (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Inkblot (B1)

IPP (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jbone (B1)

Jillium (B1)

Josephine (B1)

Kahve (B1)

Kailash (B1)

Kat63 (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

Lauryn (B1)

LeeLot (B1)

Legion (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Lifestyle (B1)

Llorona (B1)

Longacauda (B1)

LoveandHonor (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Maleldil (B1)

Malkin71 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

Mistert4 (B1)

MitKao (B1)

Morbach (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Novak (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

Pacos19 (B1)

PDRPv (B1)

Pearsonia (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Pickrel13 (B1)

Piglet (B1)

PinheadLarry (B1)

PinkLady16 (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prann (B1)

ProfessorX (B1)

Puhltonio (B1)

PuraVida (B1)

Pyro (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Rolex (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

Scooterbug (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Speckles (B1)

Squid (B1)

Squiggle (B1)

Squirt12 (B1)

Steve27 (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Tigris (B1)

Timmi (B1)

TomBombadil (B1)

Tre (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

Ulysses2016 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vivamus (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Wunderlich (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Ypsitucky (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Arbiter (B2)

Ares (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Julius (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

CharlesTrout (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Gulsi (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Littleengine (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

OrangeOswald (B3)

Phaedrus (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

RomaT (B3)

SassBadger (B3)

Tydolla (B3)

Yahalom (B3)

Zollars18 (B3)

Adawi (B4)

AlanGrant (B4)

Bane1 (B4)

Bane2 (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Halloween (B4)

Hangman (B4)

JAMaL (B4)

LeapingLizzy (B4)

Nigel (B4)

Paliothales9 (B4)

RawrgerThat (B4)

Skruzzles (B4)

Stinger (B4)

TheRipper (B4)

Tvorc (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Larry28 (B7)

Saguaro (B7)

Tapir (B7)

Annotation StatusIn GenBank
Plaque NotesSmall clear plaques, turbid margins.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Gyarad_001
(small terminase)

Gyarad_002
(terminase)

Gyarad_003

Gyarad_004

Gyarad_005

Gyarad_006
(RuvC)

Gyarad_007

Gyarad_008

Gyarad_009
(portal protein)

Gyarad_0010
(HNH endonuclease)

Gyarad_0011

Gyarad_0012
(structural protein)

Gyarad_0013

Gyarad_0014

Gyarad_0015

Gyarad_0016

Gyarad_0017

Gyarad_0018
(structural protein)

Gyarad_0019

Gyarad_0020

Gyarad_0021
(RDF protein)

Gyarad_0022

Gyarad_0023

Gyarad_0024

Gyarad_0025

Gyarad_0026

Gyarad_0027

Gyarad_0028
(tapemeasure protein)

Gyarad_0029

Gyarad_0030

Gyarad_0031
(structural protein)

Gyarad_0032
(structural protein)

Gyarad_0033
(structural protein)

Gyarad_0034

Gyarad_0035

Gyarad_0036

Gyarad_0037

Gyarad_0038

Gyarad_0039

Gyarad_0040

Gyarad_0041

Gyarad_0042
(structural protein)

Gyarad_0043

Gyarad_0044

Gyarad_0045
(AlpA)

Gyarad_0046
(HTH/DNA binding domain protein)

Gyarad_0047

Gyarad_0048
(LysA)

Gyarad_0049
(LysB)

Gyarad_0050

Gyarad_0051

Gyarad_0052
(type III restriction protein)

Gyarad_0053

Gyarad_0054

Gyarad_0055

Gyarad_0056
(replicative helicase)

Gyarad_0057

Gyarad_0058

Gyarad_0059
(DNA polymerase I)

Gyarad_0060

Gyarad_0062
(RDF protein)

Gyarad_0063

Gyarad_0064

Gyarad_0065

Gyarad_0066

Gyarad_0067

Gyarad_0068

Gyarad_0069
(RNaseE)

Gyarad_0070

Gyarad_0071

Gyarad_0072
(PLA2-like domain protein)

Gyarad_0073

Gyarad_0074

Gyarad_0075

Gyarad_0076

Gyarad_0077

Gyarad_0078

Gyarad_0079

Gyarad_0080
(RDF protein)

Gyarad_0081

Gyarad_0082

Gyarad_0083
(putative HNH protein)

Gyarad_0084

Gyarad_0085

Gyarad_0086

Gyarad_0087
(putative HNH protein)

Gyarad_0088

Gyarad_0089

Gyarad_0090

Gyarad_0091

Gyarad_0092

Gyarad_0093

Gyarad_0094

Gyarad_0095

Gyarad_0096

Gyarad_0097

Gyarad_0098

Gyarad_0099

Gyarad_00100
(RDF protein)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJX649099
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2009BRYOgyrad05KL
SEA Lysate Titer unknown
Date of SEA Lysate Titering Sep 29, 2009
Pitt Freezer Box# 1
Pitt Freezer Box Grid# 9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload