Detailed Information for Phage Cazares |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Isaac Cazares |
Year Found | 2023 |
Location Found | Alamo, TX Hidalgo |
Finding Institution | South Texas College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 26.17188 N, 98.09246 W Map |
Discovery Notes | The sample was taken from a residential yard that has dogs, termite killer had also recently been applied to the lawn. The sample was a dry soil that was collected next to a garage/driveway area. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2207 |
Genome length (bp) | 16915 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | South Texas College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ114735 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
10.5 x 10^9 |
Pitt Freezer Box# |
188 |
Pitt Freezer Box Grid# |
A9 |
Available Files |
GenBank File for Phamerator | Download |