| Detailed Information for Phage Avvas | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Alexa Van Veghen and Ashely Shearer |
| Year Found | 2023 |
| Location Found | Cleveland, TN United States |
| Finding Institution | Lee University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 35.16861 N, 84.8656 W Map |
| Discovery Notes | This phage was pulled from a plate of another lab group that had multiple plaque morphologies on it. This phage was isolated from soil of a dorm on campus. |
| Naming Notes | This phage was named after the students that discovered it. Ashley and Alexa. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 8, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2077 |
| Genome length (bp) | 17452 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAlucard Anseraureola Aries55 Astro16 Avvas Azizam Aztec Baine BarBear Belthelas BinkBonk Bintii Biscayne Bodhi17 BonaeVitae BoomRoasted Bradley2 Bri160 BrokMonster Bullzi2019 Burgy BurtonThePup Cayde6 Cazares Charbie Chatham Cheesecake Ciel Clownery Concrete DaftyDuck Danimal Danno Dongwon Dooby Douggie EdElric Efeko Eightball Ekko14 Elspeth Erin Gabbspett Gardevoir Gillker Godfather GoldenBlanche Goobery HarperAnne Hernandez44 Horacetta Hulk Jahseh JaimeB Jannah Jerky JoBros JooneeDee Josuke JRok Kaijohn KayPaulus Kevanna KillerTomato Kojax4 KyriosFaba LaviMo Leafy LemonPepper LionelHutz Livingwater Loca Lola20 Lunatic Luxx Majesty ManAs Maneater MasterPitts McShie MelBee03 Miaurora Minima MirimarMandM MrGreen Naby Namsahir NeumannU Niffler Nobel Noelani Oaklynn Octopus Otwor Owens PaoPu Picnic Pondwater PoRanda Publix Puddles3 PuffyCat Quaker Rhogar Rhysand RoscoWindex Sage7 SantasSleigh Sara Scamander Scrunchy SeaWolves Sippinontea Slentz Slizam Snuffles Stem TeddyBoy TimoTea TinyTruffula TomBrady12 Trireme Upsilon Vanisius VitulaEligans Witch Wolfpack Yami Yasuo YertPhresh Yubaba |
| Annotating Institution | Lee University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2024) |
| Plaque Notes | Plaques were larger. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAvvas_Draft_1 Avvas_Draft_2 Avvas_Draft_3 Avvas_Draft_4 Avvas_Draft_5 Avvas_Draft_6 Avvas_Draft_7 Avvas_Draft_8 Avvas_Draft_9 Avvas_Draft_10 Avvas_Draft_11 Avvas_Draft_12 Avvas_Draft_14 Avvas_Draft_15 Avvas_Draft_16 Avvas_Draft_17 Avvas_Draft_18 Avvas_Draft_19 Avvas_Draft_20 Avvas_Draft_21 Avvas_Draft_22 Avvas_Draft_23 Avvas_Draft_24 Avvas_Draft_25 Avvas_Draft_26 Avvas_Draft_27 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 171 |
| Pitt Freezer Box Grid# | G11 |