Detailed Information for Phage Bodhi17 |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Ella Conway |
Year Found | 2023 |
Location Found | Oxford, OH United States |
Finding Institution | Miami University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 24°C |
GPS Coordinates | 39.51855 N, 84.73685 W Map |
Discovery Notes | The sample was collected from a dry area with little or mostly dead vegetation. |
Naming Notes | Named after my dog Bodhi who we bought in 2017. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 23, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 977 |
Genome length (bp) | 17482 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Lysogeny Notes | Plaques were observed to be lytic and very clear. |
Other Cluster Members |
|
Annotating Institution | Miami University |
Annotation Status | In GenBank |
Plaque Notes | Clear, isolated plaques formed. |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978867 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
6.3x10^8 pfu/mL |
Pitt Freezer Box# |
185 |
Pitt Freezer Box Grid# |
G8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |