| Detailed Information for Phage Namsahir | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Andrea Palermo and Gabriela Mercado |
| Year Found | 2019 |
| Location Found | Caguas, PR Puerto Rico |
| Finding Institution | Universidad Ana G. Mendez, Gurabo campus |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 18.238423 N, 66.04946 W Map |
| Discovery Notes | The sample was taken from a garbage container located in the garden of a house where the soil was partially dry. The temperature of was 28 C |
| Naming Notes | Named after the students that worked with said phage (Namir and Sahily) |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 13, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 6317 |
| Genome length (bp) | 17176 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAnseraureola Aries55 Azizam Aztec BarBear Belthelas BonaeVitae BoomRoasted Bradley2 Bri160 BrokMonster Bullzi2019 BurtonThePup Cheesecake Ciel Concrete Danno Dongwon Efeko Eightball Gardevoir HarperAnne Hernandez44 Hulk Jahseh Jannah Jerky JoBros Josuke JRok Kaijohn KayPaulus LaviMo Leafy Livingwater Lola20 Lunatic Luxx Majesty ManAs McShie Miaurora Minima MrGreen Naby Namsahir NeumannU Nobel Noelani Octopus Otwor Owens PaoPu Pondwater PoRanda Quaker Rhysand Sara Scamander Scrunchy SeaWolves Sippinontea Slentz TeddyBoy TimoTea TinyTruffula TomBrady12 Trireme Vanisius VitulaEligans Wolfpack Yasuo YertPhresh Yubaba |
| Annotating Institution | Universidad Ana G. Mendez, Gurabo campus |
| Annotation Status | In GenBank |
| Plaque Notes | • circular with small halo • overall small plaques • Defined borders |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewNamsahir_1 Namsahir_2 Namsahir_3 Namsahir_4 Namsahir_5 Namsahir_6 Namsahir_7 Namsahir_8 Namsahir_9 Namsahir_10 Namsahir_11 Namsahir_12 Namsahir_14 Namsahir_15 Namsahir_16 Namsahir_17 Namsahir_18 Namsahir_19 Namsahir_20 Namsahir_21 Namsahir_22 Namsahir_23 Namsahir_24 Namsahir_25 Namsahir_26 Namsahir_27 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MW055909 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 98 |
| Pitt Freezer Box Grid# | E7 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |