| Detailed Information for Phage Namsahir | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Andrea Palermo and Gabriela Mercado |
| Year Found | 2019 |
| Location Found | Caguas, PR Puerto Rico |
| Finding Institution | Universidad Ana G. Mendez, Gurabo campus |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 18.238423 N, 66.04946 W Map |
| Discovery Notes | The sample was taken from a garbage container located in the garden of a house where the soil was partially dry. The temperature of was 28 C |
| Naming Notes | Named after the students that worked with said phage (Namir and Sahily) |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 13, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 6317 |
| Genome length (bp) | 17176 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAries55 Azizam Belthelas BonaeVitae Bradley2 Bri160 Bullzi2019 BurtonThePup Cheesecake Ciel Danno Dongwon Efeko HarperAnne Hernandez44 Hulk Jahseh Jerky JoBros JRok Kaijohn KayPaulus LaviMo Livingwater Lunatic Luxx Majesty McShie Miaurora Minima Naby Namsahir NeumannU Nobel Noelani Otwor Owens PaoPu PoRanda Quaker Rhysand Scamander Scrunchy SeaWolves Sippinontea Slentz TeddyBoy TimoTea TinyTruffula Trireme Vanisius VitulaEligans Wolfpack YertPhresh |
| Annotating Institution | Universidad Ana G. Mendez, Gurabo campus |
| Annotation Status | Awaiting_QC |
| Plaque Notes | • circular with small halo • overall small plaques • Defined borders |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewNamsahir_Draft_1 Namsahir_Draft_2 Namsahir_Draft_3 Namsahir_Draft_4 Namsahir_Draft_5 Namsahir_Draft_6 Namsahir_Draft_7 Namsahir_Draft_8 Namsahir_Draft_9 Namsahir_Draft_10 Namsahir_Draft_11 Namsahir_Draft_13 Namsahir_Draft_14 Namsahir_Draft_15 Namsahir_Draft_16 Namsahir_Draft_17 Namsahir_Draft_18 Namsahir_Draft_19 Namsahir_Draft_20 Namsahir_Draft_21 Namsahir_Draft_22 Namsahir_Draft_23 Namsahir_Draft_24 Namsahir_Draft_25 Namsahir_Draft_26 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 98 |
| Pitt Freezer Box Grid# | E7 |
| Available Files | |
| Plaque Picture | Download |