| Detailed Information for Phage Charbie | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Former names | Marlie |
| Duplicates of this Phage | LongOnyx |
| Found By | Laura Altfeld |
| Year Found | 2022 |
| Location Found | Wesley Chapel, FL USA |
| Finding Institution | Saint Leo University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 28.249373 N, 82.25206 W Map |
| Discovery Notes | This phage was isolated from a soil sample taken from my backyard vegetable bed. The soil is amended with compost (kitchen/garden waste and composted cow manure). |
| Naming Notes | The phage looks like a ball on a rope, so it’s affectionately named after my two dogs, Charlie and Mila. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jul 18, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 5592 |
| Genome length (bp) | 17428 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAlucard Anseraureola Aries55 Astro16 Azizam Aztec Baine BarBear Belthelas BinkBonk BonaeVitae BoomRoasted Bradley2 Bri160 BrokMonster Bullzi2019 Burgy BurtonThePup Charbie Chatham Cheesecake Ciel Clownery Concrete Danimal Danno Dongwon Dooby Douggie EdElric Efeko Eightball Ekko14 Elspeth Erin Gardevoir Gillker GoldenBlanche Goobery HarperAnne Hernandez44 Horacetta Hulk Jahseh JaimeB Jannah Jerky JoBros JooneeDee Josuke JRok Kaijohn KayPaulus Kevanna KillerTomato Kojax4 KyriosFaba LaviMo Leafy LionelHutz Livingwater Loca Lola20 Lunatic Luxx Majesty ManAs Maneater McShie MelBee03 Miaurora Minima MirimarMandM MrGreen Naby Namsahir NeumannU Niffler Nobel Noelani Octopus Otwor Owens PaoPu Picnic Pondwater PoRanda Publix PuffyCat Quaker Rhogar Rhysand Sara Scamander Scrunchy SeaWolves Sippinontea Slentz Slizam Stem TeddyBoy TimoTea TinyTruffula TomBrady12 Trireme Upsilon Vanisius VitulaEligans Witch Wolfpack Yasuo YertPhresh Yubaba |
| Annotating Institution | Saint Leo University |
| Annotation Status | Being Annotated (Expected completion by 1/18/2024) |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCharbie_Draft_1 Charbie_Draft_2 Charbie_Draft_3 Charbie_Draft_4 Charbie_Draft_5 Charbie_Draft_6 Charbie_Draft_7 Charbie_Draft_8 Charbie_Draft_9 Charbie_Draft_10 Charbie_Draft_11 Charbie_Draft_12 Charbie_Draft_14 Charbie_Draft_15 Charbie_Draft_16 Charbie_Draft_17 Charbie_Draft_18 Charbie_Draft_19 Charbie_Draft_20 Charbie_Draft_21 Charbie_Draft_22 Charbie_Draft_23 Charbie_Draft_24 Charbie_Draft_25 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |