| Detailed Information for Phage Oaklynn | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Elizabeth Honsaker |
| Year Found | 2023 |
| Location Found | Keyser, WV United States |
| Finding Institution | Allegany College of Maryland |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 25°C |
| GPS Coordinates | 39.42942 N, 78.92577 W Map |
| Discovery Notes | Soil Type: Dry loam Found off route 46 (near Keyser WV) Depth: 1-2 cm Temp: 25.6 Degrees Celsius |
| Naming Notes | Someone named their dog Oaklynn Mae, and I really liked the name. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2335 |
| Genome length (bp) | 17385 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CCCGCCCCA |
| GC Content | 68.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAlucard Anseraureola Aries55 Astro16 Avvas Azizam Aztec Baine BarBear Belthelas BinkBonk Bintii Biscayne Bodhi17 BonaeVitae BoomRoasted Bradley2 Bri160 BrokMonster Bullzi2019 Burgy BurtonThePup Cayde6 Cazares Charbie Chatham Cheesecake Ciel Clownery Concrete DaftyDuck Danimal Danno Dongwon Dooby Douggie EdElric Efeko Eightball Ekko14 Elspeth Erin Gabbspett Gardevoir Gillker Godfather GoldenBlanche Goobery HarperAnne Hernandez44 Horacetta Hulk Jahseh JaimeB Jannah Jerky JoBros JooneeDee Josuke JRok Kaijohn KayPaulus Kevanna KillerTomato Kojax4 KyriosFaba LaviMo Leafy LemonPepper LionelHutz Livingwater Loca Lola20 Lunatic Luxx Majesty ManAs Maneater MasterPitts McShie MelBee03 Miaurora Minima MirimarMandM MrGreen Naby Namsahir NeumannU Niffler Nobel Noelani Oaklynn Octopus Otwor Owens PaoPu Picnic Pondwater PoRanda Publix Puddles3 PuffyCat Quaker Rhogar Rhysand RoscoWindex Sage7 SantasSleigh Sara Scamander Scrunchy SeaWolves Sippinontea Slentz Slizam Snuffles Stem TeddyBoy TimoTea TinyTruffula TomBrady12 Trireme Upsilon Vanisius VitulaEligans Witch Wolfpack Yami Yasuo YertPhresh Yubaba |
| Annotating Institution | Allegany College of Maryland |
| Annotation Status | Being Annotated (Expected completion by 5/17/2024) |
| Plaque Notes | The plaques were on average about 4mm in diameter. They were clear, small (not tiny) dots on the plates. The borders on the plaques were distinct. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewOaklynn_Draft_1 Oaklynn_Draft_2 Oaklynn_Draft_3 Oaklynn_Draft_4 Oaklynn_Draft_5 Oaklynn_Draft_6 Oaklynn_Draft_7 Oaklynn_Draft_8 Oaklynn_Draft_9 Oaklynn_Draft_10 Oaklynn_Draft_11 Oaklynn_Draft_12 Oaklynn_Draft_14 Oaklynn_Draft_15 Oaklynn_Draft_16 Oaklynn_Draft_17 Oaklynn_Draft_18 Oaklynn_Draft_19 Oaklynn_Draft_20 Oaklynn_Draft_21 Oaklynn_Draft_22 Oaklynn_Draft_23 Oaklynn_Draft_24 Oaklynn_Draft_25 Oaklynn_Draft_26 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 22.5*10^9 |
| Pitt Freezer Box# | 171 |
| Pitt Freezer Box Grid# | G9 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
