Detailed Information for Phage Gabbspett |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Gabriela Zayas |
Year Found | 2023 |
Location Found | Gurabo, PR Puerto Rico |
Finding Institution | Universidad Ana G. Mendez, Gurabo campus |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 25°C |
GPS Coordinates | 18.24914 N, 65.945878 W Map |
Discovery Notes | I took the sample in an area where animals were found, the place where I took it was from a park. The ground was wet since it was raining that day. |
Naming Notes | I chose this name because the combination of my boyfriend name and mine. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 12, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 35082 |
Genome length (bp) | 17482 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CCCGCCCCA |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Universidad Ana G. Mendez, Gurabo campus |
Annotation Status | In GenBank |
Plaque Notes | Quite large, with fairly defined edges, and they have a clear color. |
Number of Genes | 25 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ868993 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
GenBank File for Phamerator | Download |